RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 CRIP1P50238 77 aa11.5□□□□□ -0.57
CHTOP-206ENST00000495554 ZNF502Q8TBZ5 544 aa11.5□□□□□ -0.57
CHTOP-206ENST00000495554 NDFIP1Q9BT67 221 aa11.5□□□□□ -0.57
CHTOP-206ENST00000495554 ZFYVE26Q68DK2 2539 aa11.5□□□□□ -0.57
CHTOP-206ENST00000495554 M0R2Z0 102 aa11.5□□□□□ -0.57
CHTOP-206ENST00000495554 Q6AWC8 147 aa11.5□□□□□ -0.57
CHTOP-206ENST00000495554 CELSR1Q9NYQ6 3014 aa11.49□□□□□ -0.57
CHTOP-206ENST00000495554 IGHV4-61A0A0C4DH41 118 aa11.49□□□□□ -0.57
CHTOP-206ENST00000495554 RHOGP84095 191 aa11.49□□□□□ -0.57
CHTOP-206ENST00000495554 PAX8Q06710 450 aa11.49□□□□□ -0.57
CHTOP-206ENST00000495554 STPG4Q8N801 248 aa11.49□□□□□ -0.57
CHTOP-206ENST00000495554 ASCL2Q99929 193 aa11.49□□□□□ -0.57
CHTOP-206ENST00000495554 UTP20O75691 2785 aaKnown RBP11.49□□□□□ -0.57
CHTOP-206ENST00000495554 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.49□□□□□ -0.57
CHTOP-206ENST00000495554 GPR183P32249 361 aa11.49□□□□□ -0.57
CHTOP-206ENST00000495554 FAM181BA6NEQ2 426 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 RIGQ13278 110 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 PRR31Q5SQ13 230 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 CHCHD1Q96BP2 118 aaKnown RBP11.48□□□□□ -0.57
CHTOP-206ENST00000495554 C8orf49Q96NF6 230 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 CCL19Q99731 98 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 CRYBG3Q68DQ2 2970 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 TRAV25A0A0B4J276 109 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 PRB1P04280 392 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 PRB4P10163 310 aaPredicted RBP11.48□□□□□ -0.57
CHTOP-206ENST00000495554 COX8CQ7Z4L0 72 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 C10orf105Q8TEF2 133 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 URB1-AS1Q96HZ7 61 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 SMAD5-AS1Q9Y6J3 95 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 MYO18BQ8IUG5 2567 aa11.48□□□□□ -0.57
CHTOP-206ENST00000495554 BBC3Q96PG8 261 aaPredicted RBP11.47□□□□□ -0.57
CHTOP-206ENST00000495554 MAP1AP78559 2803 aaPredicted RBP11.47□□□□□ -0.57
CHTOP-206ENST00000495554 ARMS2P0C7Q2 107 aa11.47□□□□□ -0.57
CHTOP-206ENST00000495554 CELSR2Q9HCU4 2923 aa11.47□□□□□ -0.57
CHTOP-206ENST00000495554 IGHV3-35A0A0C4DH35 117 aa11.46□□□□□ -0.57
CHTOP-206ENST00000495554 C5orf56Q8N8D9 126 aa11.46□□□□□ -0.57
CHTOP-206ENST00000495554 GATD1Q8NB37 220 aa11.46□□□□□ -0.57
CHTOP-206ENST00000495554 TPPP3Q9BW30 176 aa11.46□□□□□ -0.57
CHTOP-206ENST00000495554 ZFAND3Q9H8U3 227 aa11.46□□□□□ -0.57
CHTOP-206ENST00000495554 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.58
CHTOP-206ENST00000495554 G3V318 75 aa11.46□□□□□ -0.58
CHTOP-206ENST00000495554 SNAI2O43623 268 aa11.46□□□□□ -0.58
CHTOP-206ENST00000495554 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.58
CHTOP-206ENST00000495554 CTRLP40313 264 aa11.46□□□□□ -0.58
CHTOP-206ENST00000495554 PMCHL1Q16048 86 aa11.46□□□□□ -0.58
CHTOP-206ENST00000495554 PRR25Q96S07 402 aa11.46□□□□□ -0.58
CHTOP-206ENST00000495554 PIMREGQ9BSJ6 248 aa11.46□□□□□ -0.58
CHTOP-206ENST00000495554 SS18L2Q9UHA2 77 aa11.46□□□□□ -0.58
CHTOP-206ENST00000495554 IGHV3OR16-8A0A075B7F1 116 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 LINC01548A6NM66 108 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 C2orf70A6NJV1 201 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 G3V4G9 280 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 BUB3O43684 328 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 SPATA45Q537H7 98 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 EEF1AKMT3Q96AZ1 226 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
CHTOP-206ENST00000495554 IGHV3OR16-10A0A075B7F0 116 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 IGHV4-30-2A0A087WSY4 118 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 TRBV7-1A0A0A6YYK4 115 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 OR11H12B2RN74 326 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 SH2D1AO60880 128 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 IGHG4P01861 327 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 PET117Q6UWS5 81 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 OR11H1Q8NG94 326 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 A0A087X0K7 114 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 CLEC19AQ6UXS0 136 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 GEMIN7Q9H840 131 aaKnown RBP11.44□□□□□ -0.58
CHTOP-206ENST00000495554 MOB4Q9Y3A3 225 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 ZNF462Q96JM2 2506 aa11.44□□□□□ -0.58
CHTOP-206ENST00000495554 IGHV1-69DA0A0B4J2H0 117 aa11.43□□□□□ -0.58
CHTOP-206ENST00000495554 IGHV1-69P01742 117 aa11.43□□□□□ -0.58
CHTOP-206ENST00000495554 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
CHTOP-206ENST00000495554 OR1N2Q8NGR9 330 aa11.43□□□□□ -0.58
CHTOP-206ENST00000495554 PIFOQ8TCI5 191 aa11.43□□□□□ -0.58
CHTOP-206ENST00000495554 IGHV1-24A0A0C4DH33 117 aa11.43□□□□□ -0.58
CHTOP-206ENST00000495554 Q6ZVH6 145 aa11.43□□□□□ -0.58
CHTOP-206ENST00000495554 AZU1P20160 251 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 IGFL4Q6B9Z1 124 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 ZNF493Q6ZR52 646 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 TMEM219Q86XT9 240 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 KLHDC1Q8N7A1 406 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 NRGNQ92686 78 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 VGLL1Q99990 258 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 TMEM70Q9BUB7 260 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 CLPSL1A2RUU4 121 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 M0QXV9 152 aa11.42□□□□□ -0.58
CHTOP-206ENST00000495554 CRXO43186 299 aaPredicted RBP11.41□□□□□ -0.58
CHTOP-206ENST00000495554 OR5AL1P0C617 328 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 HLA-DMBP28068 263 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 TCTEX1D4Q5JR98 221 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 BRD3OSQ6XYD6 125 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 Q8TAT8 98 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 UQCR10Q9UDW1 63 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 CSMD2Q7Z408 3487 aa11.41□□□□□ -0.58
CHTOP-206ENST00000495554 TMSB15BA0A087X1C1 80 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms