RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 DEFB112Q30KQ8 113 aa11.98□□□□□ -0.49
SHISA5-216ENST00000494854 C1orf194Q5T5A4 169 aa11.98□□□□□ -0.49
SHISA5-216ENST00000494854 C16orf54Q6UWD8 224 aa11.98□□□□□ -0.49
SHISA5-216ENST00000494854 C12orf54Q6X4T0 127 aa11.98□□□□□ -0.49
SHISA5-216ENST00000494854 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
SHISA5-216ENST00000494854 IGKV2-40A0A087WW87 121 aaPredicted RBP11.97□□□□□ -0.49
SHISA5-216ENST00000494854 IGHV3-66A0A0C4DH42 116 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 A0A1B0GXF2 115 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 IGKV2D-40P01614 121 aaPredicted RBP11.97□□□□□ -0.49
SHISA5-216ENST00000494854 IGHG4P01861 327 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 APOHP02749 345 aaPredicted RBP11.97□□□□□ -0.49
SHISA5-216ENST00000494854 ARL3P36405 182 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 GDF5OSQ5U4N7 250 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 IGFL4Q6B9Z1 124 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
SHISA5-216ENST00000494854 ZNF207O43670 478 aaKnown RBP11.96□□□□□ -0.49
SHISA5-216ENST00000494854 HLA-DMBP28068 263 aa11.96□□□□□ -0.49
SHISA5-216ENST00000494854 LINC00310P59036 64 aa11.96□□□□□ -0.49
SHISA5-216ENST00000494854 SLAQ13239 276 aa11.96□□□□□ -0.49
SHISA5-216ENST00000494854 RBPMS2Q6ZRY4 209 aaKnown RBP11.96□□□□□ -0.49
SHISA5-216ENST00000494854 BAGE3Q86Y29 109 aa11.96□□□□□ -0.49
SHISA5-216ENST00000494854 C8orf49Q96NF6 230 aa11.96□□□□□ -0.49
SHISA5-216ENST00000494854 U3KQE9 123 aa11.96□□□□□ -0.49
SHISA5-216ENST00000494854 IGHV3OR16-13A0A075B7E8 117 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 IGHV3-74A0A0B4J1X5 117 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 FBLL1A6NHQ2 334 aaKnown RBP11.96□□□□□ -0.5
SHISA5-216ENST00000494854 IGHV4-59P01825 116 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 ESDP10768 282 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 SRIP30626 198 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 CAMPP49913 170 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 CRIP1P50238 77 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 JOSD1Q15040 202 aaPredicted RBP11.96□□□□□ -0.5
SHISA5-216ENST00000494854 OR10J3Q5JRS4 329 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 DNLZQ5SXM8 178 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 Q6YL49 198 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 PGLYRP4Q96LB8 373 aa11.96□□□□□ -0.5
SHISA5-216ENST00000494854 F2Z2F3 143 aa11.95□□□□□ -0.5
SHISA5-216ENST00000494854 SERF1AO75920 110 aa11.95□□□□□ -0.5
SHISA5-216ENST00000494854 CT45A10P0DMU9 189 aa11.95□□□□□ -0.5
SHISA5-216ENST00000494854 PF4V1P10720 104 aa11.95□□□□□ -0.5
SHISA5-216ENST00000494854 HBBP68871 147 aa11.95□□□□□ -0.5
SHISA5-216ENST00000494854 TMEM86BQ8N661 226 aa11.95□□□□□ -0.5
SHISA5-216ENST00000494854 SLC50A1Q9BRV3 221 aa11.95□□□□□ -0.5
SHISA5-216ENST00000494854 IGHV3-49A0A0A0MS15 119 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.94□□□□□ -0.5
SHISA5-216ENST00000494854 ZNF705FA8MVS1 300 aaPredicted RBP11.94□□□□□ -0.5
SHISA5-216ENST00000494854 IGLV1-40P01703 118 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 TRBV12-3P01733 135 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 GZMBP10144 247 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 LCN12Q6JVE5 192 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 DUX5Q96PT3 197 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 KLK15Q9H2R5 256 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 HOXA3O43365 443 aaPredicted RBP11.94□□□□□ -0.5
SHISA5-216ENST00000494854 CFHR3Q02985 330 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 SAPCD1Q5SSQ6 148 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 PRR25Q96S07 402 aa11.94□□□□□ -0.5
SHISA5-216ENST00000494854 NDUFA4O00483 81 aa11.93□□□□□ -0.5
SHISA5-216ENST00000494854 IGHV3-11P01762 117 aa11.93□□□□□ -0.5
SHISA5-216ENST00000494854 FOXA3P55318 350 aaPredicted RBP11.93□□□□□ -0.5
SHISA5-216ENST00000494854 COX8CQ7Z4L0 72 aa11.93□□□□□ -0.5
SHISA5-216ENST00000494854 OR5R1Q8NH85 324 aa11.93□□□□□ -0.5
SHISA5-216ENST00000494854 VGLL1Q99990 258 aa11.93□□□□□ -0.5
SHISA5-216ENST00000494854 SSBP4Q9BWG4 385 aaPredicted RBP11.93□□□□□ -0.5
SHISA5-216ENST00000494854 ZNF580Q9UK33 172 aa11.93□□□□□ -0.5
SHISA5-216ENST00000494854 PAFAH1B2P68402 229 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 A0A0G2JLM5 398 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 A8MWP6 167 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 HAX1O00165 279 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 UNQ9165/PRO28630Q6UXU0 137 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 RNF182Q8N6D2 247 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 C3orf56Q8N813 242 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 OR4X2Q8NGF9 303 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 Q8TAT8 98 aa11.92□□□□□ -0.5
SHISA5-216ENST00000494854 TMEM95Q3KNT9 176 aa11.91□□□□□ -0.5
SHISA5-216ENST00000494854 FAM162BQ5T6X4 162 aa11.91□□□□□ -0.5
SHISA5-216ENST00000494854 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
SHISA5-216ENST00000494854 PRAC2D3DTV9 90 aa11.9□□□□□ -0.5
SHISA5-216ENST00000494854 SH2D1AO60880 128 aa11.9□□□□□ -0.5
SHISA5-216ENST00000494854 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
SHISA5-216ENST00000494854 GLMPQ8WWB7 406 aa11.9□□□□□ -0.5
SHISA5-216ENST00000494854 TRAV8-2A0A0B4J237 113 aa11.9□□□□□ -0.51
SHISA5-216ENST00000494854 RBAKDNA6NC62 111 aa11.9□□□□□ -0.51
SHISA5-216ENST00000494854 C18orf32Q8TCD1 76 aa11.9□□□□□ -0.51
SHISA5-216ENST00000494854 RCHY1Q96PM5 261 aa11.9□□□□□ -0.51
SHISA5-216ENST00000494854 ERCC8Q13216 396 aa11.89□□□□□ -0.51
SHISA5-216ENST00000494854 FAM209BQ5JX69 171 aa11.89□□□□□ -0.51
SHISA5-216ENST00000494854 Q6AWC8 147 aa11.89□□□□□ -0.51
SHISA5-216ENST00000494854 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
SHISA5-216ENST00000494854 KCNS1Q96KK3 526 aa11.89□□□□□ -0.51
SHISA5-216ENST00000494854 ALKBH7Q9BT30 221 aaPredicted RBP11.89□□□□□ -0.51
SHISA5-216ENST00000494854 NDFIP1Q9BT67 221 aa11.89□□□□□ -0.51
SHISA5-216ENST00000494854 ZNF747Q9BV97 191 aa11.89□□□□□ -0.51
SHISA5-216ENST00000494854 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
SHISA5-216ENST00000494854 NBEAL1Q6ZS30 2694 aa11.88□□□□□ -0.51
SHISA5-216ENST00000494854 A0A1B0GUT8 65 aa11.88□□□□□ -0.51
SHISA5-216ENST00000494854 TMEM189A5PLL7 270 aa11.88□□□□□ -0.51
SHISA5-216ENST00000494854 NPFFR1Q9GZQ6 430 aa11.88□□□□□ -0.51
SHISA5-216ENST00000494854 VPREB3Q9UKI3 123 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms