RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 S100A1P23297 94 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 NUDT2P50583 147 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TAS2R45P59539 299 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 RPS28P62857 69 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 PLCXD2Q0VAA5 305 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 C2orf83Q53S99 150 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 AMTNQ6UX39 209 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 LCA10Q71F78 164 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 SPANXA2-OT1Q8N9U9 137 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 APCDD1LQ8NCL9 501 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 FDCSPQ8NFU4 85 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 DNAJC9Q8WXX5 260 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 BORCS8Q96FH0 119 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TMEM133Q9H2Q1 129 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIGD1AQ9Y241 93 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 RBM7Q9Y580 266 aaKnown RBP1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 DNAJC15Q9Y5T4 150 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 PTPN13Q12923 2485 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HRNRQ86YZ3 2850 aaPredicted RBP1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 APCP25054 2843 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 EML6Q6ZMW3 1958 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 ZNF469Q96JG9 3925 aaPredicted RBP1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 PCNX1Q96RV3 2341 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 MEIKINA0A087WXM9 373 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 A0A1B0GX51 115 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 DHRS12A0PJE2 317 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 C17orf51A8MQB3 221 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 C16orf90A8MZG2 172 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 ATP6V1G2-DDX39BF2Z307 99 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 F8W036 122 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 DLEU1O43261 78 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 SLC25A20O43772 301 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 IFNA7P01567 189 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 MT-ND4LP03901 98 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TRGC2P03986 189 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 IGKV3-11P04433 115 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 PRM2P04554 102 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 CXCL1P09341 107 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 LINC00032P0C843 101 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 IGHV3-30-3P0DP02 117 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 DEFA4P12838 97 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BOP23527 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 NPPCP23582 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BBP33778 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 CSN1S1P47710 185 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 RAB5CP51148 216 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BDP58876 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BCP62807 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HOXC5Q00444 222 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 FOXF1Q12946 379 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 IGFBP7Q16270 282 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST2H2BEQ16778 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 LINC01554Q52M75 96 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 RASL11AQ6T310 242 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 COMMD6Q7Z4G1 85 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 BPIFA4PQ86YQ2 179 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TMEM229BQ8NBD8 167 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 PLPP5Q8NEB5 264 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 C1orf64Q8NEQ6 169 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 OR51T1Q8NGJ9 327 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BHQ93079 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 MALSU1Q96EH3 234 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 TEX37Q96LM6 180 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BNQ99877 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BMQ99879 126 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 C2orf88Q9BSF0 95 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 NDFIP1Q9BT67 221 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 SMIM3Q9BZL3 60 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 NKX6-2Q9C056 277 aaPredicted RBP1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 OR2H1Q9GZK4 316 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 LPAR5Q9H1C0 372 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 PROK2Q9HC23 129 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 ANAPC11Q9NYG5 84 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 COPZ2Q9P299 210 aa1.95□□□□□ -2.1
DEPDC1-204ENST00000489862 DOPEY1Q5JWR5 2465 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 PDZD2O15018 2839 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 UNC79Q9P2D8 2635 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 NINQ8N4C6 2090 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 A0A0G2JMM0 328 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 A0A1W2PPB8 328 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 A0A1W2PRS3 328 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 GGT3PA6NGU5 568 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 C17orf98A8MV24 154 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 KIR3DP1A8MWS1 328 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 C5orf58C9J3I9 102 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 J3QQQ9 107 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 AIPO00170 330 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 OVOL1O14753 267 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 SH2D1AO60880 128 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 LY6HO94772 140 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 APOC1P02654 83 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 NFYBP25208 207 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 RRAS2P62070 204 aaPredicted RBP1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 GNGT1P63211 74 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 CCL20P78556 96 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 NEDD8Q15843 81 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 NDUFA5Q16718 116 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 LDLRAD2Q5SZI1 272 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 SLC25A34Q6PIV7 304 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms