RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 RPS3P23396 243 aaKnown RBP eCLIP-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 MT4P47944 62 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 MYL6P60660 151 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 GOLT1AQ6ZVE7 132 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 GNPDA2Q8TDQ7 276 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 PRAP1Q96NZ9 151 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 SIGMAR1Q99720 223 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 CST11Q9H112 138 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 PLCE1Q9P212 2302 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 MYH3P11055 1940 aa-0.8□□□□□ -2.54
R3HDM1-214ENST00000480793 ADCY9O60503 1353 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 UBR4Q5T4S7 5183 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 KIAA1109Q2LD37 5005 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 CETN3O15182 167 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 IFNA7P01567 189 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 SPRR2DP22532 72 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 NEDD8Q15843 81 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 KRTAP19-8Q3LI54 63 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 FAM213BQ8TBF2 198 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 ZNF714Q96N38 554 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 CSPG4Q6UVK1 2322 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 PRKDCP78527 4128 aaKnown RBP-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 ACANP16112 2415 aa-0.81□□□□□ -2.54
R3HDM1-214ENST00000480793 CPDO75976 1380 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 LAMC3Q9Y6N6 1575 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 TMEM114B3SHH9 223 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 CST7O76096 145 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 PHBP35232 272 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 POU6F1Q14863 301 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 TAF1AQ15573 450 aaPredicted RBP-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 OR8J2Q8NGG1 315 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 GPX7Q96SL4 187 aaPredicted RBP-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 USP54Q70EL1 1684 aa-0.82□□□□□ -2.54
R3HDM1-214ENST00000480793 PCF11O94913 1555 aaKnown RBP-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 DLEC1Q9Y238 1755 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 TNS1Q9HBL0 1735 aaKnown RBP-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 FXYD1O00168 92 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 HMGB3O15347 200 aaKnown RBP-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 RPP14O95059 124 aaKnown RBP-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 GYPBP06028 91 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 VMA21Q3ZAQ7 101 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 PHF5AQ7RTV0 110 aaKnown RBP-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 FAM216BQ8N7L0 139 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 C5orf17Q8NAS9 161 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 OR10X1Q8NGY0 326 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 CCL4L1Q8NHW4 92 aa-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 MRPL35Q9NZE8 188 aaKnown RBP-0.83□□□□□ -2.54
R3HDM1-214ENST00000480793 RREB1Q92766 1687 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 PLB1Q6P1J6 1458 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 MAP1AP78559 2803 aaPredicted RBP-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 TRGC2P03986 189 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 ETV6P41212 452 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 NCALDP61601 193 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 HSPE1P61604 102 aaKnown RBP-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 SNRPD3P62318 126 aaKnown RBP-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 COMMD3Q9UBI1 195 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 SOGA1O94964 1423 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 ANKRD31Q8N7Z5 1873 aa-0.84□□□□□ -2.54
R3HDM1-214ENST00000480793 LAMB1P07942 1786 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 HELZP42694 1942 aaKnown RBP-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 TRAV5A0A0B4J249 113 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 UNC13BO14795 1591 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 LYRM1O43325 122 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 HIST1H2BKO60814 126 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 BANF1O75531 89 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 PRM1P04553 51 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 HIST1H2BJP06899 126 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 CST2P09228 141 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 MPC1LP0DKB6 136 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 ERVS71-1P61550 626 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 CCL7P80098 99 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 AKIRIN2Q53H80 203 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 HACD4Q5VWC8 232 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 CD109Q6YHK3 1445 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 CARD19Q96LW7 228 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 CFAP53Q96M91 514 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 ENY2Q9NPA8 101 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 TMEM14BQ9NUH8 114 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 STARD9Q9P2P6 4700 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 EPPK1P58107 5090 aaKnown RBP-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 MYH1P12882 1939 aa-0.85□□□□□ -2.55
R3HDM1-214ENST00000480793 PDZD2O15018 2839 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 IGF2P01344 180 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 IFNA4P05014 189 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 HBBP68871 147 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 COX6A2Q02221 97 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 KLKP1Q107X0 134 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 FKBP1CQ5VVH2 108 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 IZUMO2Q6UXV1 221 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 OR4C12Q96R67 309 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 EFCAB11Q9BUY7 163 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 MAP1LC3BQ9GZQ8 125 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 MRPL36Q9P0J6 103 aaKnown RBP-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 FAM32AQ9Y421 112 aaKnown RBP-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 PIK3C2AO00443 1686 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 GVINP1Q7Z2Y8 2422 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 RTL9Q8NET4 1388 aa-0.86□□□□□ -2.55
R3HDM1-214ENST00000480793 KIAA0100Q14667 2235 aaKnown RBP-0.87□□□□□ -2.55
R3HDM1-214ENST00000480793 IFITM1P13164 125 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms