RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 PINLYPA6NC86 204 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 PPIFP30405 207 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 RSPO4Q2I0M5 234 aaPredicted RBP4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 PRSS57Q6UWY2 283 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 ANKRD36A6QL64 1941 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 HERV-K104P63124 156 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 Q71RC1 249 aaPredicted RBP4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 RNF166Q96A37 237 aaPredicted RBP4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 DOCK8Q8NF50 2099 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 ZNF236Q9UL36 1845 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 IGHV3-11P01762 117 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 PF4P02776 101 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 HERVK_113P63121 156 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 KLRD1Q13241 179 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 LINC00479Q96M42 142 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 TGFAP01135 160 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 CEND1Q8N111 149 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 C11orf44Q8N8P7 122 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 HS3ST6Q96QI5 342 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 TP53TG1Q9Y2A0 90 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 TRBV25-1A0A075B6N4 114 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 NDUFS7O75251 213 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 LOXP28300 417 aaPredicted RBP4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 ZNF491Q8N8L2 437 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 CYYR1Q96J86 154 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 METRNQ9UJH8 293 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 RNASE1P07998 156 aaKnown RBP4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 ANKRD31Q8N7Z5 1873 aa4.92□□□□□ -1.62
PRPF4B-205ENST00000480058 MDC1Q14676 2089 aaKnown RBP4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 IGHV1OR15-1A0A075B7D0 117 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 FGF6P10767 208 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 FOXI2Q6ZQN5 318 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 IGKV3-20P01619 116 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 ELANEP08246 267 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 PDE6GP18545 87 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 TMEM258P61165 79 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 SS18Q15532 418 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 C1orf159Q96HA4 380 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 TIMM17AQ99595 171 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 H3BMG7 143 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 DMRTC2Q8IXT2 367 aaPredicted RBP4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 PIFOQ8TCI5 191 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 TRAV8-3A0A0A6YYJ7 113 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 ATP1A1-AS1Q5TC04 95 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 Q8TAT8 98 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 TMEM126AQ9H061 195 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 LAMTOR3Q9UHA4 124 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 RALGAPA2Q2PPJ7 1873 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 CDK5RAP2Q96SN8 1893 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 IGLL5B9A064 214 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 F8WEM9 126 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 ATOX1O00244 68 aa4.91□□□□□ -1.62
PRPF4B-205ENST00000480058 TMEM213A2RRL7 107 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 CRYGCP07315 174 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 ANKRD29Q8N6D5 301 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 DOCK7Q96N67 2140 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 TRAV12-3A0A0B4J271 114 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 LHFPL4Q7Z7J7 247 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 S4R3C0 116 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 DOCK3Q8IZD9 2030 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 CRYBA4P53673 196 aa4.9□□□□□ -1.62
PRPF4B-205ENST00000480058 CCL19Q99731 98 aa4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 IGKV3OR2-268A0A0C4DH90 116 aa4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 C17orf58Q2M2W7 97 aa4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 Q6ZR03 302 aa4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 TDRD15B5MCY1 1934 aaKnown RBP4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 DICER1Q9UPY3 1922 aaKnown RBP4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 OTOFQ9HC10 1997 aa4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 MPDZO75970 2070 aa4.9□□□□□ -1.63
PRPF4B-205ENST00000480058 CR1LQ2VPA4 569 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 KRTAP27-1Q3LI81 207 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 TAF1LQ8IZX4 1826 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 GATD1Q8NB37 220 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 PLXNA1Q9UIW2 1896 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 IGHV3OR16-8A0A075B7F1 116 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 C11orf1Q9H5F2 150 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 SORL1Q92673 2214 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 PRSS29PA6NIE9 313 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 CCL25O15444 150 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 HIST1H4AP62805 103 aaKnown RBP4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 FOXE3Q13461 319 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 NTN5Q8WTR8 489 aaPredicted RBP4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 TEX48A0A1B0GUV7 120 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 Q0VFX4 171 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 C15orf53Q8NAA6 179 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 MYOFQ9NZM1 2061 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 IGHV3-66A0A0C4DH42 116 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 IGKV1-17P01599 117 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 PROK2Q9HC23 129 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 RGPD4Q7Z3J3 1758 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 NRXN2Q9P2S2 1712 aa4.89□□□□□ -1.63
PRPF4B-205ENST00000480058 J3QLI3 93 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 OVOL3O00110 214 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 CTRLP40313 264 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 MLANAQ16655 118 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 CCDC168Q8NDH2 2452 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 A0A1B0GUS0 222 aa4.88□□□□□ -1.63
PRPF4B-205ENST00000480058 JMJD7-PLA2G4BH0Y9G9 81 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms