RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 Q8N8P6 123 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 CCL26Q9Y258 94 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 IGLV3-16A0A075B6K0 115 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 IGHV2-70DA0A0C4DH43 119 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 PYYP10082 97 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 CRYBA4P53673 196 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 LINC00311Q8N616 119 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 GVQW1Q8N7I0 195 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 GLIS1Q8NBF1 620 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 ACACAQ13085 2346 aa4.42□□□□□ -1.7
USF3-202ENST00000478658 TRAV40A0A0B4J280 105 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 F8VVB4 439 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 F8VWA3 439 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 SAP25Q8TEE9 199 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 TNRC6BQ9UPQ9 1833 aaKnown RBP4.41□□□□□ -1.7
USF3-202ENST00000478658 ATG2AQ2TAZ0 1938 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 ANAPC1Q9H1A4 1944 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 CTGFP29279 349 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 FOXA3P55318 350 aaPredicted RBP4.41□□□□□ -1.7
USF3-202ENST00000478658 IGHV3-64A0A075B6Q5 118 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 IGHV1OR15-1A0A075B7D0 117 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 C9orf118A6NHY6 69 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 NTF4P34130 210 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 GUSBP1Q15486 140 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 A0A087X0K7 114 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 TRAV1-1A0A0B4J248 108 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 IGHV1-69DA0A0B4J2H0 117 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 RBAKDNA6NC62 111 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 A8MWP6 167 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 B5MCH6 92 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 ELANEP08246 267 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 P0C879 139 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 C8orf86Q6ZUL3 223 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 APCDD1LQ8NCL9 501 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 ST6GALNAC3Q8NDV1 305 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 SP7Q8TDD2 431 aaPredicted RBP4.41□□□□□ -1.7
USF3-202ENST00000478658 BPESC1Q9GZL8 116 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 TRAV12-1A0A0B4J245 112 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 VMO1Q7Z5L0 202 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 MSRB3Q8IXL7 192 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 C20orf197Q8N268 126 aa4.41□□□□□ -1.7
USF3-202ENST00000478658 PEAR1Q5VY43 1037 aaPredicted RBP4.4□□□□□ -1.7
USF3-202ENST00000478658 SIPA1L3O60292 1781 aaPredicted RBP4.4□□□□□ -1.7
USF3-202ENST00000478658 PKDREJQ9NTG1 2253 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 IGHV2OR16-5A0A0B4J2B6 119 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 BPY2O14599 106 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 PFN2P35080 140 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 C16orf47Q6ZP98 133 aaPredicted RBP4.4□□□□□ -1.7
USF3-202ENST00000478658 TET2Q6N021 2002 aaPredicted RBP4.4□□□□□ -1.7
USF3-202ENST00000478658 TICRRQ7Z2Z1 1910 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 CEP192Q8TEP8 1941 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 LINC00527Q9UJ94 153 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 SCO2A0A1W2PP80 73 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 PAX9P55771 341 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 GFI1BQ5VTD9 330 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 DEFB105AQ8NG35 78 aa4.4□□□□□ -1.7
USF3-202ENST00000478658 FGF16O43320 207 aa4.4□□□□□ -1.71
USF3-202ENST00000478658 C18orf12Q96KH6 178 aa4.4□□□□□ -1.71
USF3-202ENST00000478658 V9GYV3 84 aa4.4□□□□□ -1.71
USF3-202ENST00000478658 SERF1AO75920 110 aa4.4□□□□□ -1.71
USF3-202ENST00000478658 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.71
USF3-202ENST00000478658 LGALS9CQ6DKI2 356 aa4.4□□□□□ -1.71
USF3-202ENST00000478658 GFI1Q99684 422 aa4.4□□□□□ -1.71
USF3-202ENST00000478658 FAM236DA0A1B0GTK5 79 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 FAM236CP0DP71 79 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 DSCAMO60469 2012 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 C3orf79P0CE67 100 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 PPP1R3EQ9H7J1 279 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 MGAMO43451 1857 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 KIAA1549Q9HCM3 1950 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 IGHV3-66A0A0C4DH42 116 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 A0A0U1RRA0 63 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 F8VRH5 84 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 EFNA2O43921 213 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 Q6ZVQ6 151 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 TP53TG1Q9Y2A0 90 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 LYZL1Q6UWQ5 148 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 SIGLEC1Q9BZZ2 1709 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 NPYP01303 97 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 ZNF497Q6ZNH5 498 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 GAFA1Q96PS6 74 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 DHRS4-AS1Q9P1J3 65 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 IGKV1OR2-108A0A075B7D4 117 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 COA6Q5JTJ3 125 aaKnown RBP4.39□□□□□ -1.71
USF3-202ENST00000478658 C1QL3Q5VWW1 255 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 NPDC1Q9NQX5 325 aaPredicted RBP4.39□□□□□ -1.71
USF3-202ENST00000478658 ERVH48-1M5A8F1 160 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 LINC00322Q6ZN03 302 aaPredicted RBP4.39□□□□□ -1.71
USF3-202ENST00000478658 NRACQ8N912 160 aa4.39□□□□□ -1.71
USF3-202ENST00000478658 KIAA1551Q9HCM1 1747 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 FOXS1O43638 330 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 SH2D1AO60880 128 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 IGHV3-11P01762 117 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 COX7BP24311 80 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 TRBV19A0A075B6N1 114 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 IGHV2-26A0A0B4J1V2 119 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 A6NNC1 897 aa4.38□□□□□ -1.71
USF3-202ENST00000478658 HEPN1Q6WQI6 88 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms