RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 FAM27BQ5VT28 67 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 SCIMPQ6UWF3 145 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 AAED1Q7RTV5 226 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 LINC00311Q8N616 119 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 ACBD7Q8N6N7 88 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 CCL4L1Q8NHW4 92 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 CHCHD1Q96BP2 118 aaKnown RBP1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 COMMD3Q9UBI1 195 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 BOKQ9UMX3 212 aaPredicted RBP1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 DNAJC15Q9Y5T4 150 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 KIF13BQ9NQT8 1826 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 WDR97A6NE52 1622 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 TRPM1Q7Z4N2 1603 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 MYOM3Q5VTT5 1437 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 STRCP1A6NGW2 1772 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 KDM5CP41229 1560 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 FRMPD1Q5SYB0 1578 aa1.72□□□□□ -2.13
SMNDC1-205ENST00000477763 LRRC7Q96NW7 1537 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 TRPM6Q9BX84 2022 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 XIRP1Q702N8 1843 aaKnown RBP1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 IQSEC2Q5JU85 1478 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 LRP6O75581 1613 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 TRBV20-1A0A075B6N2 111 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 A0A0G2JMM0 328 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 LOC100130705A0A1B0GUX0 176 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 PVALEFA0A1B0GWK0 134 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 A0A1W2PPB8 328 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 KIR3DP1A8MWS1 328 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 LYRM1O43325 122 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 OR1I1O60431 355 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 PYYP10082 97 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 CCL4P13236 92 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 FABP4P15090 132 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 ZNF93P35789 620 aaPredicted RBP1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 GNG2P59768 71 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 SNRPD3P62318 126 aaKnown RBP1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 CDK5R1Q15078 307 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 ESRGQ1W209 222 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 ASB16-AS1Q495Z4 193 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 MEIG1Q5JSS6 88 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 TEX261Q6UWH6 196 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 Q6ZQT0 140 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 C8orf59Q8N0T1 100 aaPredicted RBP1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 C10orf111Q8N326 155 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 WFDC11Q8NEX6 87 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 NAA38Q9BRA0 125 aaKnown RBP1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 SPANXDQ9BXN6 97 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 SLC35B3Q9H1N7 401 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 SAR1AQ9NR31 198 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 TAS2R4Q9NYW5 299 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 RGS12O14924 1447 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 NALCNQ8IZF0 1738 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 DLC1Q96QB1 1528 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 ARHGEF12Q9NZN5 1544 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 PIK3C2AO00443 1686 aa1.71□□□□□ -2.14
SMNDC1-205ENST00000477763 MYH10P35580 1976 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 RAPGEF2Q9Y4G8 1499 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 LOC107986453A0A1B0GWG9 222 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 OR51F1A6NGY5 319 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 C17orf112F2Z3M2 114 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 DSCAMO60469 2012 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 YPEL1O60688 119 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 IFNA17P01571 189 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 SHBGP04278 402 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 CTSDP07339 412 aaPredicted RBP1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 DEFA4P12838 97 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 HIST1H1DP16402 221 aaKnown RBP1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 TMEM258P61165 79 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 BLCAPP62952 87 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 PRDM2Q13029 1718 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 NNATQ16517 81 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 TPRXLQ17RH7 258 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 LINC01545Q5VT33 79 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 COPS9Q8WXC6 57 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 DPH3Q96FX2 82 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 CIB3Q96Q77 187 aaPredicted RBP1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 RETNLBQ9BQ08 111 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 TIMM21Q9BVV7 248 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 METTL1Q9UBP6 276 aaKnown RBP1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 IER3IP1Q9Y5U9 82 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 LY96Q9Y6Y9 160 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 SIPA1L1O43166 1804 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 ERICH3Q5RHP9 1530 aa1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.7□□□□□ -2.14
SMNDC1-205ENST00000477763 COL1A1P02452 1464 aaPredicted RBP1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 PLXNA3P51805 1871 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 SPEF2Q9C093 1822 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 TRAV12-2A0A075B6T6 113 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 TMSB15BA0A087X1C1 80 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 PNMA8CA0A1B0GUJ8 204 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 SPAARA0A1B0GVQ0 90 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 TMEM218A2RU14 115 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 ZNF737O75373 536 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 RBP4P02753 201 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 BAALC-AS2P0C853 105 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 SLC25A4P12235 298 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 SPANXN5Q5MJ07 72 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 ZNF826PQ6ZT77 177 aa1.69□□□□□ -2.14
SMNDC1-205ENST00000477763 Q8IYB0 196 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms