RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-210	ENST00000470086	SDC2	P34741	201 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	TCL1A	P56279	114 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	TAS2R46	P59540	309 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	SEC61G	P60059	68 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	MRPL23	Q16540	153 aa	Known RBP	5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	TRIM16L	Q309B1	348 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	FAM159A	Q6UWV7	190 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	LHFPL1	Q86WI0	220 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	C10orf126	Q8N4M7	172 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	ZNF431	Q8TF32	576 aa	Predicted RBP	5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	BLNK	Q8WV28	456 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	RPUSD4	Q96CM3	377 aa	Known RBP	5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	C20orf144	Q9BQM9	153 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	HHLA3	Q9XRX5	114 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	MUC17	Q685J3	4493 aa		5.24	□□□□□ -1.57
LSM2-210	ENST00000470086	RAB19	A4D1S5	217 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086		K7EP13	123 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	PGAM2	P15259	253 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	CD300C	Q08708	224 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	IDNK	Q5T6J7	187 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	RNASEK	Q6P5S7	137 aa	Known RBP	5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	PRSS48	Q7RTY5	328 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	PACRGL	Q8N7B6	248 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	OR4D10	Q8NGI6	311 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	TRGV9	Q99603	122 aa		5.23	□□□□□ -1.57
LSM2-210	ENST00000470086	SMCO3	A2RU48	225 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	ORM2	P19652	201 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	RPS19	P39019	145 aa	Known RBP	5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	RAB14	P61106	215 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	POLR2G	P62487	172 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	ZNF846	Q147U1	533 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	SAMD13	Q5VXD3	122 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	MORN5	Q5VZ52	161 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	AKAP14	Q86UN6	197 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	SELENOH	Q8IZQ5	122 aa	Known RBP	5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	OR1B1	Q8NGR6	318 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	PYGO2	Q9BRQ0	406 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	MRPL32	Q9BYC8	188 aa	Known RBP	5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	RBKS	Q9H477	322 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086	RPH3AL	Q9UNE2	315 aa		5.22	□□□□□ -1.57
LSM2-210	ENST00000470086		A0A0A6YYH2	397 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	TRAV5	A0A0B4J249	113 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	RBFOX3	A6NFN3	312 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086		A6NJ64	397 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	SNRPGP15	A8MWD9	76 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	RANBP1	P43487	201 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	PRR27	Q6MZM9	219 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	CD164L2	Q6UWJ8	174 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	DAZ4	Q86SG3	579 aa	Known RBP	5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	OR4D5	Q8NGN0	318 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	OR13C8	Q8NGS7	320 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	RNASE11	Q8TAA1	199 aa	Known RBP	5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	SLC35E1	Q96K37	410 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	LINC00477	Q96M19	166 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	LINC01600	Q96MT4	127 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	SHANK2-AS3	Q9BTD1	123 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	ZNF331	Q9NQX6	463 aa	Predicted RBP	5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	DAZ3	Q9NR90	486 aa	Known RBP	5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	CRCT1	Q9UGL9	99 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	FSIP2	Q5CZC0	6907 aa		5.21	□□□□□ -1.58
LSM2-210	ENST00000470086	PMS2P5	A8MQ11	134 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	NDUFS6	O75380	124 aa	Known RBP	5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	CDS2	O95674	445 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	RCVRN	P35243	200 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	AQP4	P55087	323 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	KRTAP10-8	P60410	259 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	ERCC8	Q13216	396 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	TMEM268	Q5VZI3	342 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	FAAP20	Q6NZ36	180 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	LPCAT3	Q6P1A2	487 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	PATE2	Q6UY27	113 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	LGI3	Q8N145	548 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	ZNF680	Q8NEM1	530 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	DTD1	Q8TEA8	209 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	PAXX	Q9BUH6	204 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	TMEM222	Q9H0R3	208 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	C8orf4	Q9NR00	106 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	SCN3B	Q9NY72	215 aa		5.2	□□□□□ -1.58
LSM2-210	ENST00000470086	TRGV4	A0A0C4DH28	118 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	C7orf71	A4D174	169 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	RNF222	A6NCQ9	220 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	KLLN	B2CW77	178 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	IAPP	P10997	89 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	CDC34	P49427	236 aa	Predicted RBP	5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	SNRPE	P62304	92 aa	Known RBP	5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	ASAH1	Q13510	395 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	KCNIP4	Q6PIL6	250 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	EIF4E3	Q8N5X7	224 aa	Known RBP	5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	OR10P1	Q8NGE3	313 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	MARCH1	Q8TCQ1	289 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	RBPMS	Q93062	196 aa	Known RBP	5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	FAM19A4	Q96LR4	140 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	DIABLO	Q9NR28	239 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	FLVCR2	Q9UPI3	526 aa		5.19	□□□□□ -1.58
LSM2-210	ENST00000470086	IGHV3-16	A0A0C4DH30	117 aa		5.18	□□□□□ -1.58
LSM2-210	ENST00000470086	FBLL1	A6NHQ2	334 aa	Known RBP	5.18	□□□□□ -1.58
LSM2-210	ENST00000470086		F5H697	171 aa		5.18	□□□□□ -1.58
LSM2-210	ENST00000470086	LAGE3	Q14657	143 aa		5.18	□□□□□ -1.58
LSM2-210	ENST00000470086	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 219.5 ms