RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 PHYHIPLQ96FC7 376 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 OR51M1Q9H341 326 aa7.18□□□□□ -1.26
SF3A3-204ENST00000462258 TIMM8BQ9Y5J9 83 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-204ENST00000462258 C7orf71A4D174 169 aa7.17□□□□□ -1.26
SF3A3-204ENST00000462258 F5H768 121 aa7.17□□□□□ -1.26
SF3A3-204ENST00000462258 SLC25A5P05141 298 aaKnown RBP7.17□□□□□ -1.26
SF3A3-204ENST00000462258 NBEAP1P0C6P0 100 aa7.17□□□□□ -1.26
SF3A3-204ENST00000462258 UBE2L3P68036 154 aaKnown RBP7.17□□□□□ -1.26
SF3A3-204ENST00000462258 BTN1A1Q13410 526 aa7.17□□□□□ -1.26
SF3A3-204ENST00000462258 CCDC28AQ8IWP9 274 aa7.17□□□□□ -1.26
SF3A3-204ENST00000462258 SCGB1C1Q8TD33 95 aa7.17□□□□□ -1.26
SF3A3-204ENST00000462258 PYGO2Q9BRQ0 406 aa7.17□□□□□ -1.26
SF3A3-204ENST00000462258 NOP10Q9NPE3 64 aaKnown RBP7.17□□□□□ -1.26
SF3A3-204ENST00000462258 CBY3A6NI87 242 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 SNURFLB1AK76 121 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 KLLNB2CW77 178 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 KHDC3LQ587J8 217 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 TMEM78Q5T7P6 136 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 C9orf47Q6ZRZ4 202 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 RNF141Q8WVD5 230 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 ZNF503Q96F45 646 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 FAM19A4Q96LR4 140 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 LINC00477Q96M19 166 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 AGPAT4-IT1Q9H0P7 198 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 DNAH11Q96DT5 4516 aa7.16□□□□□ -1.26
SF3A3-204ENST00000462258 DYNC1H1Q14204 4646 aaKnown RBP7.15□□□□□ -1.26
SF3A3-204ENST00000462258 IGLV2-18A0A075B6J9 118 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 CRISP2P16562 243 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 TAS2R45P59539 299 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 RNF212Q495C1 297 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 PRR9Q5T870 116 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 LINC00612Q8N6U2 182 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 ZNF680Q8NEM1 530 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 Q8TAT8 98 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 VGLL1Q99990 258 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 WFDC1Q9HC57 220 aa7.15□□□□□ -1.26
SF3A3-204ENST00000462258 HERC2O95714 4834 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 GAGE12BA1L429 117 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 M0R2N4 97 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 EIF3GO75821 320 aaKnown RBP eCLIP7.14□□□□□ -1.27
SF3A3-204ENST00000462258 GAGE7O76087 117 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 NUDT3O95989 172 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 GPX1P07203 203 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 GAGE12FP0CL80 117 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 GAGE12GP0CL81 117 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 GAGE12IP0CL82 117 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 RNASE4P34096 147 aaKnown RBP7.14□□□□□ -1.27
SF3A3-204ENST00000462258 CSN1S1P47710 185 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 CD300CQ08708 224 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 EIF4E3Q8N5X7 224 aaKnown RBP7.14□□□□□ -1.27
SF3A3-204ENST00000462258 ZFAND2AQ8N6M9 145 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 ATG101Q9BSB4 218 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 MED28Q9H204 178 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 Q9H3A6 140 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 ZNF492Q9P255 531 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 PKD1P98161 4303 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 PKHD1P08F94 4074 aa7.14□□□□□ -1.27
SF3A3-204ENST00000462258 ZNF324O75467 553 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-204ENST00000462258 NMBP08949 121 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 M6PRP20645 277 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 ZNF138P52744 262 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 RAB2AP61019 212 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 RANP62826 216 aaKnown RBP7.13□□□□□ -1.27
SF3A3-204ENST00000462258 DAZ2Q13117 558 aaKnown RBP7.13□□□□□ -1.27
SF3A3-204ENST00000462258 ZNF266Q14584 549 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 LGALS9BQ3B8N2 356 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 ACOT6Q3I5F7 207 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-204ENST00000462258 LINC00336Q6ZUF6 198 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 LYPD1Q8N2G4 141 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 C11orf72Q8NBR9 251 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 LINC00467Q9BRT7 94 aa7.13□□□□□ -1.27
SF3A3-204ENST00000462258 TRBV7-9A0A0J9YWB2 115 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 RBAKDNA6NC62 111 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 RGS13O14921 159 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 GIPP09681 153 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-204ENST00000462258 FAM3BP58499 235 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-204ENST00000462258 ANXA2RQ3ZCQ2 193 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 PQLC2Q6ZP29 291 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 Q6ZTI0 123 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 HSD17B11Q8NBQ5 300 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 AQP10Q96PS8 301 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 ARPC5LQ9BPX5 153 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 TMPRSS5Q9H3S3 457 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 GSN-AS1Q9NRJ2 163 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 RPH3ALQ9UNE2 315 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 KIAA1109Q2LD37 5005 aa7.12□□□□□ -1.27
SF3A3-204ENST00000462258 IGHV1OR15-1A0A075B7D0 117 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 TRAV26-1A0A087WT03 109 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 TRGV1A0A0A0MS02 117 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 A0A1W2PPV4 95 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 DIRC3C9JPN6 131 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 RTL8CO15255 209 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 HMGB3O15347 200 aaKnown RBP7.11□□□□□ -1.27
SF3A3-204ENST00000462258 HOXA5P20719 270 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 CDC34P49427 236 aaPredicted RBP7.11□□□□□ -1.27
SF3A3-204ENST00000462258 TCL1AP56279 114 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 OR5I1Q13606 314 aa7.11□□□□□ -1.27
SF3A3-204ENST00000462258 IBA57Q5T440 356 aaKnown RBP7.11□□□□□ -1.27
SF3A3-204ENST00000462258 Q6ZR54 194 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms