RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CCSO14618 274 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 PRAF2O60831 178 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 AZU1P20160 251 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 DAZ2Q13117 558 aaKnown RBP5.47□□□□□ -1.53
CD44-211ENST00000442151 OR5I1Q13606 314 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 TMEM78Q5T7P6 136 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 MIC13Q5XKP0 118 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 C6orf223Q8N319 242 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 ENKURQ8TC29 256 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 RNASE8Q8TDE3 154 aaKnown RBP5.47□□□□□ -1.53
CD44-211ENST00000442151 RXFP4Q8TDU9 374 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 LINC00467Q9BRT7 94 aa5.47□□□□□ -1.53
CD44-211ENST00000442151 MRPL32Q9BYC8 188 aaKnown RBP5.47□□□□□ -1.53
CD44-211ENST00000442151 TRBV7-9A0A0J9YWB2 115 aa5.46□□□□□ -1.53
CD44-211ENST00000442151 NBDYA0A0U1RRE5 68 aa5.46□□□□□ -1.53
CD44-211ENST00000442151 A0A1W2PPQ1 181 aa5.46□□□□□ -1.53
CD44-211ENST00000442151 RTL8CO15255 209 aa5.46□□□□□ -1.53
CD44-211ENST00000442151 EIF4EBP3O60516 100 aaPredicted RBP5.46□□□□□ -1.53
CD44-211ENST00000442151 EIF4E3Q8N5X7 224 aaKnown RBP5.46□□□□□ -1.53
CD44-211ENST00000442151 RNF141Q8WVD5 230 aa5.46□□□□□ -1.53
CD44-211ENST00000442151 SEC22CQ9BRL7 303 aa5.46□□□□□ -1.53
CD44-211ENST00000442151 TRBV19A0A075B6N1 114 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 UBE2L5PA0A1B0GUS4 154 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 A0A1B0GVY2 172 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 C7orf71A4D174 169 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 GPX1P07203 203 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 PET100P0DJ07 73 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 RAB32Q13637 225 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 ANXA2RQ3ZCQ2 193 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 GFI1BQ5VTD9 330 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 LYPD1Q8N2G4 141 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 SCGB1C1Q8TD33 95 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 NMES1Q9C002 83 aa5.46□□□□□ -1.54
CD44-211ENST00000442151 VPS13DQ5THJ4 4388 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 PCLOQ9Y6V0 5065 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 TRGV2A0A075B6R0 118 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 TRAV12-3A0A0B4J271 114 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 GAGE12BA1L429 117 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 PLAC8L1A1L4L8 177 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 H3BQ15 152 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 GAGE7O76087 117 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 GAGE12FP0CL80 117 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 GAGE12GP0CL81 117 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 GAGE12IP0CL82 117 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 CT45A10P0DMU9 189 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 TAS2R45P59539 299 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 DEFA1P59665 94 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 DEFA3P59666 94 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 ASAH1Q13510 395 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 FCN2Q15485 313 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 FAM74A1Q5RGS3 127 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 SSX7Q7RTT5 188 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 ZNRF2Q8NHG8 242 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 C18orf15Q96N68 181 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 OR51M1Q9H341 326 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 Q9H8V8 135 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 ZNF586Q9NXT0 402 aa5.45□□□□□ -1.54
CD44-211ENST00000442151 TRAV9-2A0A087WT02 112 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 IFNA5P01569 189 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 NBEAP1P0C6P0 100 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 IL15RAQ13261 267 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 ANKRD39Q53RE8 183 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 IBA57Q5T440 356 aaKnown RBP5.44□□□□□ -1.54
CD44-211ENST00000442151 C9orf47Q6ZRZ4 202 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 UPK3BQ9BT76 320 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 NPCDR1Q9BY65 106 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 C11orf1Q9H5F2 150 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 DNAH6Q9C0G6 4158 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 TRAV26-1A0A087WT03 109 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 TRAV5A0A0B4J249 113 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 IGSF23A1L1A6 192 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 RBAKDNA6NC62 111 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 CRISP2P16562 243 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 RNASE4P34096 147 aaKnown RBP5.44□□□□□ -1.54
CD44-211ENST00000442151 ODF1Q14990 250 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 ARL6IP6Q8N6S5 226 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 OR5C1Q8NGR4 320 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 BLNKQ8WV28 456 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 PAXXQ9BUH6 204 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 LINC00588Q9Y4M8 146 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 LENEPQ9Y5L5 61 aa5.44□□□□□ -1.54
CD44-211ENST00000442151 PRAC2D3DTV9 90 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 H3BTX0 84 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 J3KRW8 73 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 SLC17A3O00476 420 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 PRM2P04554 102 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 ZNF138P52744 262 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 ZNF415Q09FC8 603 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 ICAM4Q14773 271 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 SPXQ9BT56 116 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 AGPAT4-IT1Q9H0P7 198 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 MRPS16Q9Y3D3 137 aaKnown RBP5.43□□□□□ -1.54
CD44-211ENST00000442151 DNAH10Q8IVF4 4471 aa5.43□□□□□ -1.54
CD44-211ENST00000442151 TRGV1A0A0A0MS02 117 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 C16orf90A8MZG2 172 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 KLLNB2CW77 178 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 INMT-MINDY4F8WBC2 141 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 K7EP13 123 aa5.42□□□□□ -1.54
CD44-211ENST00000442151 UPK1BO75841 260 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms