RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HOXD3P31249 432 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 ID1P41134 155 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 FLI1Q01543 452 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 KLF5Q13887 457 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 PSG3Q16557 428 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 LCN12Q6JVE5 192 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 C10orf99Q6UWK7 81 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 UNQ9165/PRO28630Q6UXU0 137 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 GOLT1AQ6ZVE7 132 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 FAM231DQ6ZW35 169 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 TMEM183AQ8IXX5 376 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 EXOC3-AS1Q8N2X6 119 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 FAM24BQ8N5W8 94 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 WIPF2Q8TF74 440 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 DAZAP1Q96EP5 407 aaKnown RBP3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 C17orf77Q96MU5 243 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 SMR3AQ99954 134 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 NDFIP1Q9BT67 221 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 RHPN1-AS1Q9BWJ2 59 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 NRN1Q9NPD7 142 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZNF331Q9NQX6 463 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZNF492Q9P255 531 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 PEMTQ9UBM1 199 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 MLXQ9UH92 298 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 RPH3ALQ9UNE2 315 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 TSSC4Q9Y5U2 329 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 JMJD1CQ15652 2540 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZFHX3Q15911 3703 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 F8P00451 2351 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 C2CD3Q4AC94 2353 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 MAST4O15021 2626 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 ATRQ13535 2644 aa3.02□□□□□ -1.93
HMGB1P37-201ENST00000439613 WNK1Q9H4A3 2382 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGHV4OR15-8A0A075B7B6 117 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 A0A087WW49 117 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGHV3-49A0A0A0MS15 119 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 TRAV34A0A0B4J273 112 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGHV3-66A0A0C4DH42 116 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 TMEM213A2RRL7 107 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 FAM231BA6NCW3 169 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 PGPEP1LA6NFU8 196 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 A8MWL6 223 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 C1orf196B1AJZ1 125 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 INAFM1C9JVW0 142 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 K7EN84 100 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 GATCO43716 136 aaKnown RBP3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 CRLF1O75462 422 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGLV2-11P01706 119 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGLV2-8P01709 118 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 P01737 135 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 PFN1P07737 140 aaKnown RBP3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 CT45A10P0DMU9 189 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 FOLR2P14207 255 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 GCSHP23434 173 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 CBLN1P23435 193 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 SYNJ2BPP57105 145 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 RAB5BP61020 215 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 GNG5P63218 68 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 PAFAH1B2P68402 229 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR5I1Q13606 314 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 ELOBQ15370 118 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 COX19Q49B96 90 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 TCTEX1D4Q5JR98 221 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IBA57Q5T440 356 aaKnown RBP3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 TMEM78Q5T7P6 136 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGFL4Q6B9Z1 124 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 TCF24Q7RTU0 167 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 COX8CQ7Z4L0 72 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 PRNTQ86SH4 94 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 Q86TA4 180 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 KLHL30-AS1Q8NEE0 82 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR4B1Q8NGF8 309 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 LINC01006Q8NI28 216 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 FAM210BQ96KR6 192 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 LINC00479Q96M42 142 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 YPEL4Q96NS1 127 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 PYGO2Q9BRQ0 406 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 MLST8Q9BVC4 326 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 IL36BQ9NZH7 164 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 PSG8Q9UQ74 426 aa3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 FN1P02751 2386 aaKnown RBP3.01□□□□□ -1.93
HMGB1P37-201ENST00000439613 ANK3Q12955 4377 aaKnown RBP3□□□□□ -1.93
HMGB1P37-201ENST00000439613 VWFP04275 2813 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 TRAV8-1A0A0A6YYK1 113 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 TGIF2-C20orf24A0A0A6YYL0 155 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 TRAV2A0A0B4J234 112 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 TRAV8-2A0A0B4J237 113 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 TRBV7-9A0A0J9YWB2 115 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 SMIM27A0A1W2PRY6 76 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 XKRY2A2RUG3 117 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 C2orf70A6NJV1 201 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZNF705GA8MUZ8 300 aaPredicted RBP3□□□□□ -1.93
HMGB1P37-201ENST00000439613 M0R3E3 92 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 CCL24O00175 119 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 TYMSP04818 313 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 CD28P10747 220 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 RPS10P46783 165 aaKnown RBP3□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZNF138P52744 262 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 FAM3BP58499 235 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms