RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 UBE2V1Q13404 147 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 SLC25A34Q6PIV7 304 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 FMC1Q96HJ9 113 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 F11RQ9Y624 299 aaKnown RBP6.41□□□□□ -1.38
HPS4-205ENST00000429411 NPIPB5A8MRT5 1133 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 FNDC10F2Z333 226 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 TMEM30BQ3MIR4 351 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 TMEM155Q4W5P6 130 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 FAM162BQ5T6X4 162 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 PSG8Q9UQ74 426 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 BUB1B-PAK6H3BSN5 160 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 TOMM40O96008 361 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 FCER1GP30273 86 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 RPL32P62910 135 aaKnown RBP6.41□□□□□ -1.38
HPS4-205ENST00000429411 OR4A5Q8NH83 315 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 GTSF1Q8WW33 167 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 ZC2HC1AQ96GY0 325 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 LINC00527Q9UJ94 153 aa6.41□□□□□ -1.38
HPS4-205ENST00000429411 RAI1Q7Z5J4 1906 aaPredicted RBP6.41□□□□□ -1.38
HPS4-205ENST00000429411 CKS2P33552 79 aa6.4□□□□□ -1.38
HPS4-205ENST00000429411 ZNF672Q499Z4 452 aaPredicted RBP6.4□□□□□ -1.38
HPS4-205ENST00000429411 NUP37Q8NFH4 326 aa6.4□□□□□ -1.38
HPS4-205ENST00000429411 C8orf49Q96NF6 230 aa6.4□□□□□ -1.38
HPS4-205ENST00000429411 JMJD8Q96S16 334 aa6.4□□□□□ -1.38
HPS4-205ENST00000429411 IGHV1-24A0A0C4DH33 117 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 TMEM213A2RRL7 107 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 Q86TA4 180 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 HSPB8Q9UJY1 196 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 VWC2LB2RUY7 222 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 IGLV2-23P01705 113 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 PRSS1P07477 247 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 TRGV9Q99603 122 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 OTORQ9NRC9 128 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 DPM3Q9P2X0 92 aa6.4□□□□□ -1.39
HPS4-205ENST00000429411 FN1P02751 2386 aaKnown RBP6.39□□□□□ -1.39
HPS4-205ENST00000429411 SYS1-DBNDD2H3BUS1 97 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 GPR183P32249 361 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 AMN1Q8IY45 258 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 TMEM75Q8N9X5 138 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 DEFB104AQ8WTQ1 72 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 FLNAP21333 2647 aaKnown RBP6.39□□□□□ -1.39
HPS4-205ENST00000429411 D6R8Y8 96 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 FCN3O75636 299 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 IGLC1P0CG04 106 aa6.39□□□□□ -1.39
HPS4-205ENST00000429411 FAM110DQ8TAY7 271 aaPredicted RBP6.39□□□□□ -1.39
HPS4-205ENST00000429411 MRPL27Q9P0M9 148 aaKnown RBP6.39□□□□□ -1.39
HPS4-205ENST00000429411 NBR2O15453 112 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 EVI2AP22794 236 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 HLA-DMBP28068 263 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 CDSNQ15517 529 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 BCL6BQ8N143 479 aaPredicted RBP6.38□□□□□ -1.39
HPS4-205ENST00000429411 NDFIP1Q9BT67 221 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 MEGF9Q9H1U4 602 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 LOC105371242A0A075B767 164 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 IFI27P40305 119 aaPredicted RBP6.38□□□□□ -1.39
HPS4-205ENST00000429411 SMAGPQ0VAQ4 97 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 LYZL1Q6UWQ5 148 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 IGFL3Q6UXB1 125 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 OR10AG1Q8NH19 301 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 PRELID3AQ96N28 172 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 KLK15Q9H2R5 256 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 C21orf62Q9NYP8 219 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 THYN1Q9P016 225 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 SMPXQ9UHP9 88 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 DSCAML1Q8TD84 2053 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.39
HPS4-205ENST00000429411 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 CACNG7P62955 275 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 SRSF1Q07955 248 aaKnown RBP eCLIP6.38□□□□□ -1.39
HPS4-205ENST00000429411 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 CCDC144NLQ6NUI1 221 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 OR9G4Q8NGQ1 327 aa6.38□□□□□ -1.39
HPS4-205ENST00000429411 ZFHX3Q15911 3703 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 SHISA9B4DS77 424 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 GP9P14770 177 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 FAM231DQ6ZW35 169 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 THAP8Q8NA92 274 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 COL27A1Q8IZC6 1860 aaPredicted RBP6.37□□□□□ -1.39
HPS4-205ENST00000429411 CSMD2Q7Z408 3487 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 NDUFS7O75251 213 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 IGKV1-17P01599 117 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 COX6B1P14854 86 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 FBLN7Q53RD9 439 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 C12orf54Q6X4T0 127 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 CELSR1Q9NYQ6 3014 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 IGHV2-70DA0A0C4DH43 119 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 C4orf48Q5BLP8 95 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 AMMECR1LQ6DCA0 310 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 ARPC1AQ92747 370 aa6.37□□□□□ -1.39
HPS4-205ENST00000429411 PSMB11A5LHX3 300 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 ESDP10768 282 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 SPATA12Q7Z6I5 190 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 PTH2Q96A98 100 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 MBD6Q96DN6 1003 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 ERCC8Q13216 396 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 RNF182Q8N6D2 247 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 BSNQ9UPA5 3926 aa6.36□□□□□ -1.39
HPS4-205ENST00000429411 TRBV19A0A075B6N1 114 aa6.35□□□□□ -1.39
HPS4-205ENST00000429411 C7orf71A4D174 169 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms