RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
CALD1-204ENST00000417172 TMEM242Q9NWH2 141 aa12.8□□□□□ -0.36
CALD1-204ENST00000417172 S100A9P06702 114 aaKnown RBP12.79□□□□□ -0.36
CALD1-204ENST00000417172 GPR61Q9BZJ8 451 aa12.79□□□□□ -0.36
CALD1-204ENST00000417172 CSN3P07498 182 aa12.78□□□□□ -0.36
CALD1-204ENST00000417172 ZNF738Q8NE65 137 aa12.78□□□□□ -0.36
CALD1-204ENST00000417172 ZC2HC1AQ96GY0 325 aa12.78□□□□□ -0.36
CALD1-204ENST00000417172 V9GYV3 84 aa12.78□□□□□ -0.36
CALD1-204ENST00000417172 MAST4O15021 2626 aa12.78□□□□□ -0.36
CALD1-204ENST00000417172 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
CALD1-204ENST00000417172 FAM3BP58499 235 aaPredicted RBP12.78□□□□□ -0.36
CALD1-204ENST00000417172 IBA57Q5T440 356 aaKnown RBP12.78□□□□□ -0.36
CALD1-204ENST00000417172 TMEM183AQ8IXX5 376 aa12.78□□□□□ -0.36
CALD1-204ENST00000417172 C15orf54Q8N8G6 183 aa12.78□□□□□ -0.36
CALD1-204ENST00000417172 F6UB75 175 aa12.77□□□□□ -0.37
CALD1-204ENST00000417172 BMI1P35226 326 aa12.77□□□□□ -0.37
CALD1-204ENST00000417172 PEMTQ9UBM1 199 aa12.77□□□□□ -0.37
CALD1-204ENST00000417172 ATRQ13535 2644 aa12.77□□□□□ -0.37
CALD1-204ENST00000417172 TRBV6-1A0A0K0K1D8 114 aa12.76□□□□□ -0.37
CALD1-204ENST00000417172 CXorf65A6NEN9 183 aa12.76□□□□□ -0.37
CALD1-204ENST00000417172 PFN1P07737 140 aaKnown RBP12.76□□□□□ -0.37
CALD1-204ENST00000417172 NUDT10Q8NFP7 164 aa12.76□□□□□ -0.37
CALD1-204ENST00000417172 NUDT11Q96G61 164 aa12.76□□□□□ -0.37
CALD1-204ENST00000417172 SERTM2A0A1B0GWG4 89 aa12.76□□□□□ -0.37
CALD1-204ENST00000417172 MRPL53Q96EL3 112 aaKnown RBP12.76□□□□□ -0.37
CALD1-204ENST00000417172 AGPAT4-IT1Q9H0P7 198 aa12.76□□□□□ -0.37
CALD1-204ENST00000417172 AGRNO00468 2067 aa12.75□□□□□ -0.37
CALD1-204ENST00000417172 M0QZ24 198 aa12.75□□□□□ -0.37
CALD1-204ENST00000417172 PPP1R2P9O14990 202 aa12.75□□□□□ -0.37
CALD1-204ENST00000417172 ZNF688P0C7X2 276 aa12.75□□□□□ -0.37
CALD1-204ENST00000417172 CRIP1P50238 77 aa12.75□□□□□ -0.37
CALD1-204ENST00000417172 PRR25Q96S07 402 aa12.75□□□□□ -0.37
CALD1-204ENST00000417172 SAV1Q9H4B6 383 aaPredicted RBP12.75□□□□□ -0.37
CALD1-204ENST00000417172 OSTCQ9NRP0 149 aa12.75□□□□□ -0.37
CALD1-204ENST00000417172 A0A1W2PPQ1 181 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 ZNF705GA8MUZ8 300 aaPredicted RBP12.74□□□□□ -0.37
CALD1-204ENST00000417172 TMEM61Q8N0U2 210 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 SMIM12Q96EX1 92 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 ZFP30Q9Y2G7 519 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 VWFP04275 2813 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 C19orf71A6NCJ1 209 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 K7EQG2 157 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 OVOL1O14753 267 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 TCL1AP56279 114 aa12.74□□□□□ -0.37
CALD1-204ENST00000417172 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
CALD1-204ENST00000417172 FOXL1Q12952 345 aa12.73□□□□□ -0.37
CALD1-204ENST00000417172 DYNLRB2Q8TF09 96 aa12.73□□□□□ -0.37
CALD1-204ENST00000417172 BIN3Q9NQY0 253 aa12.73□□□□□ -0.37
CALD1-204ENST00000417172 SMIM6P0DI80 62 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 RAB5AP20339 215 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 ZNF80P51504 273 aaPredicted RBP12.72□□□□□ -0.37
CALD1-204ENST00000417172 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 GDF5OSQ5U4N7 250 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 IL36BQ9NZH7 164 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 IZUMO1RA6ND01 250 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 RPL19P84098 196 aaKnown RBP12.72□□□□□ -0.37
CALD1-204ENST00000417172 HIST1H1AQ02539 215 aaPredicted RBP12.72□□□□□ -0.37
CALD1-204ENST00000417172 CD300EQ496F6 205 aaPredicted RBP12.72□□□□□ -0.37
CALD1-204ENST00000417172 NDUFA11Q86Y39 141 aa12.72□□□□□ -0.37
CALD1-204ENST00000417172 CD33P20138 364 aa12.71□□□□□ -0.37
CALD1-204ENST00000417172 S100PP25815 95 aa12.71□□□□□ -0.37
CALD1-204ENST00000417172 DEFB114Q30KQ6 69 aa12.71□□□□□ -0.37
CALD1-204ENST00000417172 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
CALD1-204ENST00000417172 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
CALD1-204ENST00000417172 CLEC5AQ9NY25 188 aa12.71□□□□□ -0.37
CALD1-204ENST00000417172 ZNF492Q9P255 531 aa12.71□□□□□ -0.37
CALD1-204ENST00000417172 FBN1P35555 2871 aaKnown RBP12.7□□□□□ -0.38
CALD1-204ENST00000417172 ID1P41134 155 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 AKR1D1P51857 326 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 ZNF138P52744 262 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 FAM210BQ96KR6 192 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 A0A1B0GUS0 222 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 P01737 135 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 S100A8P05109 93 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 GZMBP10144 247 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 ZNF124Q15973 351 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 Q6ZQT7 251 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 RBPMS2Q6ZRY4 209 aaKnown RBP12.7□□□□□ -0.38
CALD1-204ENST00000417172 OR8A1Q8NGG7 326 aa12.7□□□□□ -0.38
CALD1-204ENST00000417172 TRBV24-1A0A075B6N3 115 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 J3KRW8 73 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 SPINK4O60575 86 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 SH2D1AO60880 128 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 FRMD6-AS1P0C7T7 363 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 CT45A10P0DMU9 189 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 RPS10P46783 165 aaKnown RBP12.69□□□□□ -0.38
CALD1-204ENST00000417172 SAPCD1Q5SSQ6 148 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 KCNIP4Q6PIL6 250 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 OR10J6PQ8NGY7 276 aa12.69□□□□□ -0.38
CALD1-204ENST00000417172 DAZAP1Q96EP5 407 aaKnown RBP12.69□□□□□ -0.38
CALD1-204ENST00000417172 RPP21Q9H633 154 aaKnown RBP12.69□□□□□ -0.38
CALD1-204ENST00000417172 NPIPB6E9PJ23 425 aa12.68□□□□□ -0.38
CALD1-204ENST00000417172 PRR9Q5T870 116 aa12.68□□□□□ -0.38
CALD1-204ENST00000417172 SPATA3Q8NHX4 192 aa12.68□□□□□ -0.38
CALD1-204ENST00000417172 PYGO2Q9BRQ0 406 aa12.68□□□□□ -0.38
CALD1-204ENST00000417172 FBLL1A6NHQ2 334 aaKnown RBP12.68□□□□□ -0.38
CALD1-204ENST00000417172 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
CALD1-204ENST00000417172 SNRPD3P62318 126 aaKnown RBP12.68□□□□□ -0.38
CALD1-204ENST00000417172 KRTAP24-1Q3LI83 254 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms