RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MRPS16Q9Y3D3 137 aaKnown RBP12.98□□□□□ -0.33
NUP50-203ENST00000407019 ORM1P02763 201 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 G0S2P27469 103 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 BRD3OSQ6XYD6 125 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 ZNF207O43670 478 aaKnown RBP12.97□□□□□ -0.33
NUP50-203ENST00000407019 ZNF25P17030 456 aaPredicted RBP12.97□□□□□ -0.33
NUP50-203ENST00000407019 TWIST1Q15672 202 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 OR10AG1Q8NH19 301 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 C10orf105Q8TEF2 133 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 ST20Q9HBF5 79 aa12.97□□□□□ -0.33
NUP50-203ENST00000407019 TIMM8BQ9Y5J9 83 aaPredicted RBP12.97□□□□□ -0.33
NUP50-203ENST00000407019 MED13LQ71F56 2210 aa12.96□□□□□ -0.33
NUP50-203ENST00000407019 CSMD1Q96PZ7 3565 aa12.96□□□□□ -0.33
NUP50-203ENST00000407019 IGHV3-49A0A0A0MS15 119 aa12.96□□□□□ -0.33
NUP50-203ENST00000407019 IFI27P40305 119 aaPredicted RBP12.96□□□□□ -0.33
NUP50-203ENST00000407019 MRPL51Q4U2R6 128 aaKnown RBP12.96□□□□□ -0.33
NUP50-203ENST00000407019 MRPL53Q96EL3 112 aaKnown RBP12.96□□□□□ -0.33
NUP50-203ENST00000407019 LINC00527Q9UJ94 153 aa12.96□□□□□ -0.33
NUP50-203ENST00000407019 U3KQE9 123 aa12.96□□□□□ -0.33
NUP50-203ENST00000407019 LINC01559Q495D7 138 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 IL17RELQ6ZVW7 336 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 MEGF9Q9H1U4 602 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 SIGLEC8Q9NYZ4 499 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 TRAV8-2A0A0B4J237 113 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 LOC389332A0A1B0GUA5 103 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 HSBP1L1C9JCN9 74 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 NDUFS8O00217 210 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 TRGV3P03979 118 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 ZNF575Q86XF7 245 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 ZNF747Q9BV97 191 aa12.95□□□□□ -0.34
NUP50-203ENST00000407019 hDV102S1A0JD36 115 aa12.94□□□□□ -0.34
NUP50-203ENST00000407019 H0Y8G0 127 aa12.94□□□□□ -0.34
NUP50-203ENST00000407019 CLEC2AQ6UVW9 174 aa12.94□□□□□ -0.34
NUP50-203ENST00000407019 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 PSMG3-AS1Q96PY0 264 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 CNFNQ9BYD5 112 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 AGPAT4-IT1Q9H0P7 198 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 CHD8Q9HCK8 2581 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 NCOR2Q9Y618 2525 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 IGHV4-38-2P0DP08 117 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 CKS2P33552 79 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 TFPI2P48307 235 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 FAM106AQ4KMX7 169 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 TMEM78Q5T7P6 136 aa12.93□□□□□ -0.34
NUP50-203ENST00000407019 ARL3P36405 182 aa12.92□□□□□ -0.34
NUP50-203ENST00000407019 HIST1H1AQ02539 215 aaPredicted RBP12.92□□□□□ -0.34
NUP50-203ENST00000407019 LOXL1Q08397 574 aaPredicted RBP12.92□□□□□ -0.34
NUP50-203ENST00000407019 STPG4Q8N801 248 aa12.92□□□□□ -0.34
NUP50-203ENST00000407019 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
NUP50-203ENST00000407019 MCRIP2Q9BUT9 160 aaKnown RBP12.92□□□□□ -0.34
NUP50-203ENST00000407019 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
NUP50-203ENST00000407019 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
NUP50-203ENST00000407019 IGF1P05019 195 aa12.92□□□□□ -0.34
NUP50-203ENST00000407019 ATP5J2P56134 94 aa12.92□□□□□ -0.34
NUP50-203ENST00000407019 A0A096LNJ9 63 aa12.91□□□□□ -0.34
NUP50-203ENST00000407019 SMKR1H3BMG3 65 aa12.91□□□□□ -0.34
NUP50-203ENST00000407019 DLEU1O43261 78 aa12.91□□□□□ -0.34
NUP50-203ENST00000407019 NPYP01303 97 aa12.91□□□□□ -0.34
NUP50-203ENST00000407019 HINT1P49773 126 aaPredicted RBP12.91□□□□□ -0.34
NUP50-203ENST00000407019 LY6EQ16553 131 aa12.91□□□□□ -0.34
NUP50-203ENST00000407019 ASH1LQ9NR48 2969 aaKnown RBP12.91□□□□□ -0.34
NUP50-203ENST00000407019 GLMPQ8WWB7 406 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 MS4A6AQ9H2W1 248 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 MSRB1Q9NZV6 116 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 IGHV4-30-2A0A087WSY4 118 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 NCR2O95944 276 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 GAGE1Q13065 139 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 C9orf47Q6ZRZ4 202 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 RNF185Q96GF1 192 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 C16orf92Q96LL3 132 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 PMCHL2Q9BQD1 86 aa12.9□□□□□ -0.34
NUP50-203ENST00000407019 ABCA2Q9BZC7 2435 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 IGKV3D-20A0A0C4DH25 116 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 A6NDX4 124 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 H3BUX3 64 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 C9orf139Q6ZV77 190 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 H3BUA1 57 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 IGHG2P01859 326 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 HBDP02042 147 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 PPBPP02775 128 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 MSMBP08118 114 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 SLC25A34Q6PIV7 304 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 SCRT2Q9NQ03 307 aa12.89□□□□□ -0.35
NUP50-203ENST00000407019 NDUFA4O00483 81 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 BRI3O95415 125 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 TRBV12-3P01733 135 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 OR8A1Q8NGG7 326 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 USMG5Q96IX5 58 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 C11orf21Q9P2W6 132 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 AKAP6Q13023 2319 aa12.88□□□□□ -0.35
NUP50-203ENST00000407019 TCF21O43680 179 aa12.87□□□□□ -0.35
NUP50-203ENST00000407019 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
NUP50-203ENST00000407019 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
NUP50-203ENST00000407019 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
NUP50-203ENST00000407019 MAP1LC3AQ9H492 121 aa12.87□□□□□ -0.35
NUP50-203ENST00000407019 TP73-AS1Q9UF72 201 aa12.87□□□□□ -0.35
NUP50-203ENST00000407019 SMAD7O15105 426 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms