RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 DPF1Q92782 380 aa13.47□□□□□ -0.25
PTPRA-205ENST00000399903 NPIPB5A8MRT5 1133 aa13.46□□□□□ -0.25
PTPRA-205ENST00000399903 NDUFA3O95167 84 aa13.46□□□□□ -0.25
PTPRA-205ENST00000399903 ORM1P02763 201 aa13.46□□□□□ -0.25
PTPRA-205ENST00000399903 CEND1Q8N111 149 aa13.46□□□□□ -0.25
PTPRA-205ENST00000399903 TMEM8BA6NDV4 472 aa13.46□□□□□ -0.25
PTPRA-205ENST00000399903 IGKCP01834 107 aa13.46□□□□□ -0.25
PTPRA-205ENST00000399903 MALRD1Q5VYJ5 2156 aa13.46□□□□□ -0.26
PTPRA-205ENST00000399903 LOC107984156A0A0G2JMH3 177 aa13.46□□□□□ -0.26
PTPRA-205ENST00000399903 F8W1H4 67 aa13.46□□□□□ -0.26
PTPRA-205ENST00000399903 SCGB1A1P11684 91 aa13.46□□□□□ -0.26
PTPRA-205ENST00000399903 ARL17AQ8IVW1 177 aa13.46□□□□□ -0.26
PTPRA-205ENST00000399903 CCL17Q92583 94 aa13.46□□□□□ -0.26
PTPRA-205ENST00000399903 SRSF8Q9BRL6 282 aaKnown RBP13.46□□□□□ -0.26
PTPRA-205ENST00000399903 IGHV3OR16-8A0A075B7F1 116 aa13.45□□□□□ -0.26
PTPRA-205ENST00000399903 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
PTPRA-205ENST00000399903 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
PTPRA-205ENST00000399903 SPINK8P0C7L1 97 aa13.45□□□□□ -0.26
PTPRA-205ENST00000399903 KLK15Q9H2R5 256 aa13.45□□□□□ -0.26
PTPRA-205ENST00000399903 TRGV9Q99603 122 aa13.45□□□□□ -0.26
PTPRA-205ENST00000399903 C16orf97H3BN30 126 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 SH2D1AO60880 128 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 C12orf74Q32Q52 190 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 GLMPQ8WWB7 406 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 MAP1LC3AQ9H492 121 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 NGBQ9NPG2 151 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 SMPXQ9UHP9 88 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 MAPKAPK5-AS1Q8N8E1 139 aa13.44□□□□□ -0.26
PTPRA-205ENST00000399903 IL4P05112 153 aa13.43□□□□□ -0.26
PTPRA-205ENST00000399903 ZNF562Q6V9R5 426 aa13.43□□□□□ -0.26
PTPRA-205ENST00000399903 ZNF833PQ6ZTB9 187 aa13.43□□□□□ -0.26
PTPRA-205ENST00000399903 TMEM158Q8WZ71 300 aa13.43□□□□□ -0.26
PTPRA-205ENST00000399903 MC5RP33032 325 aa13.43□□□□□ -0.26
PTPRA-205ENST00000399903 MRAP2Q96G30 205 aa13.43□□□□□ -0.26
PTPRA-205ENST00000399903 CYSLTR1Q9Y271 337 aa13.43□□□□□ -0.26
PTPRA-205ENST00000399903 TTC9CQ8N5M4 171 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 WI2-2373I1.2A0A1W2PRP0 233 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 CNIH1O95406 144 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 THBDP07204 575 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 ODF1Q14990 250 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 PTH2Q96A98 100 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 SS18L2Q9UHA2 77 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 ARHGAP32A7KAX9 2087 aa13.42□□□□□ -0.26
PTPRA-205ENST00000399903 MRPL35Q9NZE8 188 aaKnown RBP13.42□□□□□ -0.26
PTPRA-205ENST00000399903 IGHV3-35A0A0C4DH35 117 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 LYNX1G3V0Z9 82 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 LYNX1P0DP58 116 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 AAMDCQ9H7C9 122 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 IGLV3-9A0A075B6K5 115 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 TRBV19A0A075B6N1 114 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 E9PLD3 99 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 OVOL3O00110 214 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 DPM2O94777 84 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 LHBP01229 141 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 MT-ATP8P03928 68 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 GRNP28799 593 aaKnown RBP13.41□□□□□ -0.26
PTPRA-205ENST00000399903 KLF17Q5JT82 389 aaPredicted RBP13.41□□□□□ -0.26
PTPRA-205ENST00000399903 FBXL15Q9H469 300 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 A0A1B0GW15 77 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 H3BVH4 76 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 GATA3P23771 443 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 PSMB2P49721 201 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 ADIPOQQ15848 244 aa13.41□□□□□ -0.26
PTPRA-205ENST00000399903 PHLDA1Q8WV24 401 aaPredicted RBP13.41□□□□□ -0.26
PTPRA-205ENST00000399903 ANXA2RQ3ZCQ2 193 aa13.4□□□□□ -0.26
PTPRA-205ENST00000399903 TMEM200BQ69YZ2 307 aa13.4□□□□□ -0.26
PTPRA-205ENST00000399903 LINC01560Q8TB33 94 aa13.4□□□□□ -0.26
PTPRA-205ENST00000399903 HHLA3Q9XRX5 114 aa13.4□□□□□ -0.26
PTPRA-205ENST00000399903 RAI1Q7Z5J4 1906 aaPredicted RBP13.4□□□□□ -0.26
PTPRA-205ENST00000399903 FAM90A27PA6NNH2 459 aa13.4□□□□□ -0.26
PTPRA-205ENST00000399903 IGFBPL1Q8WX77 278 aa13.4□□□□□ -0.26
PTPRA-205ENST00000399903 MRPL16Q9NX20 251 aaKnown RBP13.4□□□□□ -0.26
PTPRA-205ENST00000399903 IGLV2-23P01705 113 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 EGR2P11161 476 aaPredicted RBP13.39□□□□□ -0.27
PTPRA-205ENST00000399903 Q6AWC8 147 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 RAXQ9Y2V3 346 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 UFC1Q9Y3C8 167 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 LINC00312Q9Y6C7 94 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 LYPD2Q6UXB3 125 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 RPEQ96AT9 228 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 PGPEP1Q9NXJ5 209 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 SPG11Q96JI7 2443 aa13.39□□□□□ -0.27
PTPRA-205ENST00000399903 PIEZO1Q92508 2521 aa13.38□□□□□ -0.27
PTPRA-205ENST00000399903 SIGLEC15Q6ZMC9 328 aa13.38□□□□□ -0.27
PTPRA-205ENST00000399903 HIVEP3Q5T1R4 2406 aa13.38□□□□□ -0.27
PTPRA-205ENST00000399903 IGHV3-23P01764 117 aa13.38□□□□□ -0.27
PTPRA-205ENST00000399903 ZNF48Q96MX3 618 aaPredicted RBP13.38□□□□□ -0.27
PTPRA-205ENST00000399903 C8orf86Q6ZUL3 223 aa13.38□□□□□ -0.27
PTPRA-205ENST00000399903 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
PTPRA-205ENST00000399903 TRAV26-2A0A0B4J265 109 aa13.37□□□□□ -0.27
PTPRA-205ENST00000399903 TNFRSF6BO95407 300 aa13.37□□□□□ -0.27
PTPRA-205ENST00000399903 EFNA4P52798 201 aa13.37□□□□□ -0.27
PTPRA-205ENST00000399903 RNF183Q96D59 192 aa13.37□□□□□ -0.27
PTPRA-205ENST00000399903 FCN3O75636 299 aa13.37□□□□□ -0.27
PTPRA-205ENST00000399903 NCBP2LA6PVI3 153 aaKnown RBP13.36□□□□□ -0.27
PTPRA-205ENST00000399903 COX7A1P24310 79 aa13.36□□□□□ -0.27
PTPRA-205ENST00000399903 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
PTPRA-205ENST00000399903 ZNF493Q6ZR52 646 aa13.36□□□□□ -0.27
PTPRA-205ENST00000399903 MYOZ3Q8TDC0 251 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms