RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 IGKV2-40A0A087WW87 121 aaPredicted RBP14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 HAX1O00165 279 aa14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 IGKV2D-40P01614 121 aaPredicted RBP14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 ZNF138P52744 262 aa14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 ITLN2Q8WWU7 325 aaPredicted RBP14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 JMJD8Q96S16 334 aa14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 UBE2E1P51965 193 aa14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 HIST1H1AQ02539 215 aaPredicted RBP14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 PDE6HQ13956 83 aa14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 GPR183P32249 361 aa14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 LMO4P61968 165 aa14.28□□□□□ -0.12
CHRFAM7A-202ENST00000397827 TMSB15BA0A087X1C1 80 aa14.27□□□□□ -0.12
CHRFAM7A-202ENST00000397827 A0A1B0GUT8 65 aa14.27□□□□□ -0.12
CHRFAM7A-202ENST00000397827 C15orf32Q32M92 178 aa14.27□□□□□ -0.12
CHRFAM7A-202ENST00000397827 LINC01548A6NM66 108 aa14.27□□□□□ -0.13
CHRFAM7A-202ENST00000397827 H3BUT2 72 aa14.27□□□□□ -0.13
CHRFAM7A-202ENST00000397827 ATP6V0E1O15342 81 aa14.27□□□□□ -0.13
CHRFAM7A-202ENST00000397827 HLA-DMBP28068 263 aa14.27□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CRYBA4P53673 196 aa14.27□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SMAD5-AS1Q9Y6J3 95 aa14.27□□□□□ -0.13
CHRFAM7A-202ENST00000397827 K7EP34 96 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 RPL7P18124 248 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 GNLYP22749 145 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CSN1S1P47710 185 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 RPL24P83731 157 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 FOXE3Q13461 319 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 RABAC1Q9UI14 185 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 A6NJY4 79 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SNAI2O43623 268 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CT45A10P0DMU9 189 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SCRT2Q9NQ03 307 aa14.26□□□□□ -0.13
CHRFAM7A-202ENST00000397827 IGHV1-24A0A0C4DH33 117 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 G3V318 75 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CSN3P07498 182 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 LINC00173Q6ZV60 143 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 NDFIP1Q9BT67 221 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 PKD1L2Q7Z442 2459 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 Q8TAT8 98 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 NPFFR1Q9GZQ6 430 aa14.25□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CKS1BP61024 79 aa14.24□□□□□ -0.13
CHRFAM7A-202ENST00000397827 OR2K2Q8NGT1 345 aa14.24□□□□□ -0.13
CHRFAM7A-202ENST00000397827 IGHV3OR16-10A0A075B7F0 116 aa14.24□□□□□ -0.13
CHRFAM7A-202ENST00000397827 C9orf118A6NHY6 69 aa14.24□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CLEC3BP05452 202 aa14.24□□□□□ -0.13
CHRFAM7A-202ENST00000397827 MCRIP2Q9BUT9 160 aaKnown RBP14.24□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SYS1-DBNDD2H3BUS1 97 aa14.23□□□□□ -0.13
CHRFAM7A-202ENST00000397827 PRORYQ9H606 182 aa14.23□□□□□ -0.13
CHRFAM7A-202ENST00000397827 ABCA2Q9BZC7 2435 aa14.23□□□□□ -0.13
CHRFAM7A-202ENST00000397827 RIGQ13278 110 aa14.23□□□□□ -0.13
CHRFAM7A-202ENST00000397827 FAM110DQ8TAY7 271 aaPredicted RBP14.23□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SPG11Q96JI7 2443 aa14.23□□□□□ -0.13
CHRFAM7A-202ENST00000397827 IGHV3-66A0A0C4DH42 116 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SH2D1AO60880 128 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 OR10AG1Q8NH19 301 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 ZNF502Q8TBZ5 544 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 VGLL1Q99990 258 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SCGB2A1O75556 95 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 IGHG4P01861 327 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 HSD52Q0P140 79 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 TMEM97Q5BJF2 176 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 TMEM190Q8WZ59 177 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CHCHD1Q96BP2 118 aaKnown RBP14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 IGHV3OR16-13A0A075B7E8 117 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 IGHV3-74A0A0B4J1X5 117 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 H0Y8G0 127 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SMIM17P0DL12 118 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 SEC11AP67812 179 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 TMEM219Q86XT9 240 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 TMEM191AQ9H0A3 160 aa14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 TIMM8BQ9Y5J9 83 aaPredicted RBP14.22□□□□□ -0.13
CHRFAM7A-202ENST00000397827 TEX48A0A1B0GUV7 120 aa14.21□□□□□ -0.13
CHRFAM7A-202ENST00000397827 NPFFO15130 113 aa14.21□□□□□ -0.13
CHRFAM7A-202ENST00000397827 FAM162BQ5T6X4 162 aa14.21□□□□□ -0.13
CHRFAM7A-202ENST00000397827 LYZL1Q6UWQ5 148 aa14.21□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CLEC19AQ6UXS0 136 aa14.21□□□□□ -0.13
CHRFAM7A-202ENST00000397827 PRR25Q96S07 402 aa14.21□□□□□ -0.13
CHRFAM7A-202ENST00000397827 CFAP46Q8IYW2 2715 aa14.21□□□□□ -0.14
CHRFAM7A-202ENST00000397827 CENPVL3A0A0U1RRI6 287 aa14.21□□□□□ -0.14
CHRFAM7A-202ENST00000397827 TMEM189A5PLL7 270 aa14.21□□□□□ -0.14
CHRFAM7A-202ENST00000397827 CRXO43186 299 aaPredicted RBP14.21□□□□□ -0.14
CHRFAM7A-202ENST00000397827 LEPROTL1O95214 131 aa14.21□□□□□ -0.14
CHRFAM7A-202ENST00000397827 TMEM213A2RRL7 107 aa14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 A0A0G2JLM5 398 aa14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 H3BRM9 83 aa14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 IGHV4-39P01824 125 aa14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 ZNF80P51504 273 aaPredicted RBP14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 C2orf91Q6ZV80 131 aa14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 RAB37Q96AX2 223 aa14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 CCDC140Q96MF4 163 aa14.2□□□□□ -0.14
CHRFAM7A-202ENST00000397827 PMCHL2Q9BQD1 86 aa14.19□□□□□ -0.14
CHRFAM7A-202ENST00000397827 ZFAND3Q9H8U3 227 aa14.19□□□□□ -0.14
CHRFAM7A-202ENST00000397827 LINC00527Q9UJ94 153 aa14.19□□□□□ -0.14
CHRFAM7A-202ENST00000397827 SPCS1Q9Y6A9 102 aa14.19□□□□□ -0.14
CHRFAM7A-202ENST00000397827 SERTM2A0A1B0GWG4 89 aa14.19□□□□□ -0.14
CHRFAM7A-202ENST00000397827 TSSC4Q9Y5U2 329 aaPredicted RBP14.19□□□□□ -0.14
CHRFAM7A-202ENST00000397827 IGHV3-49A0A0A0MS15 119 aa14.18□□□□□ -0.14
CHRFAM7A-202ENST00000397827 RNF182Q8N6D2 247 aa14.18□□□□□ -0.14
CHRFAM7A-202ENST00000397827 GAGE12HA6NDE8 117 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms