RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 NDUFA4O00483 81 aa12.88□□□□□ -0.35
NUP50-202ENST00000396096 SLC25A16P16260 332 aa12.88□□□□□ -0.35
NUP50-202ENST00000396096 LINC01559Q495D7 138 aa12.88□□□□□ -0.35
NUP50-202ENST00000396096 SPATA45Q537H7 98 aa12.88□□□□□ -0.35
NUP50-202ENST00000396096 FAM104BQ5XKR9 115 aa12.88□□□□□ -0.35
NUP50-202ENST00000396096 FER1L6-AS1Q8NA97 138 aa12.88□□□□□ -0.35
NUP50-202ENST00000396096 ZNF207O43670 478 aaKnown RBP12.87□□□□□ -0.35
NUP50-202ENST00000396096 TMEM70Q9BUB7 260 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 CNFNQ9BYD5 112 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 ZMAT5Q9UDW3 170 aaKnown RBP12.87□□□□□ -0.35
NUP50-202ENST00000396096 ZNF580Q9UK33 172 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
NUP50-202ENST00000396096 IGHV3OR16-13A0A075B7E8 117 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 IGHV3-74A0A0B4J1X5 117 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 A0A1B0GV90 55 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 TMEM213A2RRL7 107 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 ZNF705AQ6ZN79 300 aaPredicted RBP12.87□□□□□ -0.35
NUP50-202ENST00000396096 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
NUP50-202ENST00000396096 IGHV3-49A0A0A0MS15 119 aa12.86□□□□□ -0.35
NUP50-202ENST00000396096 C20orf202A1L168 122 aa12.86□□□□□ -0.35
NUP50-202ENST00000396096 AVPP01185 164 aa12.86□□□□□ -0.35
NUP50-202ENST00000396096 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
NUP50-202ENST00000396096 LEPROTL1O95214 131 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 IGLV1-40P01703 118 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 ZNF138P52744 262 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 HIST1H1AQ02539 215 aaPredicted RBP12.85□□□□□ -0.35
NUP50-202ENST00000396096 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 IL17RELQ6ZVW7 336 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 USP9XQ93008 2570 aaPredicted RBP12.85□□□□□ -0.35
NUP50-202ENST00000396096 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 IGLC3P0DOY3 106 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 CFHR3Q02985 330 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 KLHDC1Q8N7A1 406 aa12.85□□□□□ -0.35
NUP50-202ENST00000396096 CSMD1Q96PZ7 3565 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 TRAV9-2A0A087WT02 112 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 A0A096LNT2 108 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 ORM1P02763 201 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 BLCAPP62952 87 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 TMEM78Q5T7P6 136 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 SPATA12Q7Z6I5 190 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 UQCR10Q9UDW1 63 aa12.84□□□□□ -0.35
NUP50-202ENST00000396096 SYS1-DBNDD2H3BUS1 97 aa12.83□□□□□ -0.36
NUP50-202ENST00000396096 UNQ9165/PRO28630Q6UXU0 137 aa12.83□□□□□ -0.36
NUP50-202ENST00000396096 AMN1Q8IY45 258 aa12.83□□□□□ -0.36
NUP50-202ENST00000396096 ORMDL3Q8N138 153 aa12.83□□□□□ -0.36
NUP50-202ENST00000396096 LINC01356Q8N9X3 169 aa12.83□□□□□ -0.36
NUP50-202ENST00000396096 TMEM191AQ9H0A3 160 aa12.83□□□□□ -0.36
NUP50-202ENST00000396096 AP5S1Q9NUS5 200 aa12.83□□□□□ -0.36
NUP50-202ENST00000396096 D6R8Y8 96 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 MRPL51Q4U2R6 128 aaKnown RBP12.82□□□□□ -0.36
NUP50-202ENST00000396096 LINC00173Q6ZV60 143 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 NRGNQ92686 78 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 KLK15Q9H2R5 256 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 HSPB8Q9UJY1 196 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 FLNCQ14315 2725 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 ACACBO00763 2458 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 A0A0G2JLM5 398 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 J3QLI3 93 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 SMAD7O15105 426 aaKnown RBP12.82□□□□□ -0.36
NUP50-202ENST00000396096 CSN3P07498 182 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 TWIST1Q15672 202 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 Q6ZS46 218 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 FA2HQ7L5A8 372 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 LINC00469Q8N7U9 141 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 C16orf92Q96LL3 132 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 PRELID3AQ96N28 172 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 LENEPQ9Y5L5 61 aa12.82□□□□□ -0.36
NUP50-202ENST00000396096 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.81□□□□□ -0.368e-12■■■■□ 24.5
NUP50-202ENST00000396096 PF4V1P10720 104 aa12.81□□□□□ -0.36
NUP50-202ENST00000396096 PET117Q6UWS5 81 aa12.81□□□□□ -0.36
NUP50-202ENST00000396096 GPHB5Q86YW7 130 aa12.81□□□□□ -0.36
NUP50-202ENST00000396096 ATOH7Q8N100 152 aa12.81□□□□□ -0.36
NUP50-202ENST00000396096 PRSS3P2Q8NHM4 247 aa12.81□□□□□ -0.36
NUP50-202ENST00000396096 SOCS3O14543 225 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 NUTF2P61970 127 aaKnown RBP12.8□□□□□ -0.36
NUP50-202ENST00000396096 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 MAP1LC3CQ9BXW4 147 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 IGKV3D-20A0A0C4DH25 116 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 COX6B1P14854 86 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 OR10AG1Q8NH19 301 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 SIGLEC8Q9NYZ4 499 aa12.8□□□□□ -0.36
NUP50-202ENST00000396096 MUC21A0A0G2JKD1 596 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 MUC21A0A140T8X8 626 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 IGHV3-11P01762 117 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 PRB1P04280 392 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 MAJINQ3KP22 176 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 MUC21Q5SSG8 566 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 C20orf173Q96LM9 149 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
NUP50-202ENST00000396096 OR4C46A6NHA9 309 aa12.78□□□□□ -0.36
NUP50-202ENST00000396096 IFI27P40305 119 aaPredicted RBP12.78□□□□□ -0.36
NUP50-202ENST00000396096 RNF185Q96GF1 192 aa12.78□□□□□ -0.36
NUP50-202ENST00000396096 BBC3Q96PG8 261 aaPredicted RBP12.78□□□□□ -0.36
NUP50-202ENST00000396096 SPG11Q96JI7 2443 aa12.78□□□□□ -0.36
NUP50-202ENST00000396096 OVOL1O14753 267 aa12.78□□□□□ -0.36
NUP50-202ENST00000396096 PPBPP02775 128 aa12.78□□□□□ -0.36
NUP50-202ENST00000396096 IGLL1P15814 213 aa12.78□□□□□ -0.36
NUP50-202ENST00000396096 LINC00477Q96M19 166 aa12.78□□□□□ -0.36
NUP50-202ENST00000396096 ZNF747Q9BV97 191 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 511.9 ms