RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.35□□□□□ -0.91
ITGB1-202ENST00000396033 OR2D3Q8NGH3 330 aa9.35□□□□□ -0.91
ITGB1-202ENST00000396033 WIPF2Q8TF74 440 aaPredicted RBP9.35□□□□□ -0.91
ITGB1-202ENST00000396033 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.91
ITGB1-202ENST00000396033 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
ITGB1-202ENST00000396033 C8orf49Q96NF6 230 aa9.34□□□□□ -0.91
ITGB1-202ENST00000396033 CT45A10P0DMU9 189 aa9.34□□□□□ -0.91
ITGB1-202ENST00000396033 GTSF1Q8WW33 167 aa9.34□□□□□ -0.91
ITGB1-202ENST00000396033 CHD6Q8TD26 2715 aa9.34□□□□□ -0.91
ITGB1-202ENST00000396033 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.34□□□□□ -0.92
ITGB1-202ENST00000396033 IGLV1-40P01703 118 aa9.34□□□□□ -0.92
ITGB1-202ENST00000396033 APCSP02743 223 aa9.34□□□□□ -0.92
ITGB1-202ENST00000396033 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.92
ITGB1-202ENST00000396033 PGLYRP4Q96LB8 373 aa9.34□□□□□ -0.92
ITGB1-202ENST00000396033 GFRA4Q9GZZ7 299 aa9.34□□□□□ -0.92
ITGB1-202ENST00000396033 CREBBPQ92793 2442 aa9.34□□□□□ -0.92
ITGB1-202ENST00000396033 FSHBP01225 129 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 IGHG4P01861 327 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 CAMPP49913 170 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 CFHR3Q02985 330 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 OR4X2Q8NGF9 303 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 SLC50A1Q9BRV3 221 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 ERASQ7Z444 233 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 U3KQE9 123 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 A0A0G2JLM5 398 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 NDUFA4O00483 81 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 CDKN1BP46527 198 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 RBPMS2Q6ZRY4 209 aaKnown RBP9.33□□□□□ -0.92
ITGB1-202ENST00000396033 SPATA12Q7Z6I5 190 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 BAGE3Q86Y29 109 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 RNF182Q8N6D2 247 aa9.33□□□□□ -0.92
ITGB1-202ENST00000396033 K7EP13 123 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 SLAQ13239 276 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 C16orf54Q6UWD8 224 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 Q8TAT8 98 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 VGLL1Q99990 258 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
ITGB1-202ENST00000396033 HBBP68871 147 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 VPREB3Q9UKI3 123 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 NBPF19A0A087WUL8 3843 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 TENM4Q6N022 2769 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 APCP25054 2843 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 A0A1B0GXF2 115 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 IGLC3P0DOY3 106 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 SRIP30626 198 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 CRIP1P50238 77 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 HIST2H2BCQ6DN03 193 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 ZNF580Q9UK33 172 aa9.32□□□□□ -0.92
ITGB1-202ENST00000396033 DOPEY2Q9Y3R5 2298 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 PLA2G2AP14555 144 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 SAPCD1Q5SSQ6 148 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 PRSS57Q6UWY2 283 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 C9orf139Q6ZV77 190 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 PRR25Q96S07 402 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 Q0VG73 95 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 C8orf86Q6ZUL3 223 aa9.31□□□□□ -0.92
ITGB1-202ENST00000396033 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
ITGB1-202ENST00000396033 FOXE3Q13461 319 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 COL5A1-AS1Q5SY13 56 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 Q6YL49 198 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 PRAC2D3DTV9 90 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 J3QKU1 62 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 GLMPQ8WWB7 406 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 PRRC2AP48634 2157 aaKnown RBP9.3□□□□□ -0.92
ITGB1-202ENST00000396033 FAM162BQ5T6X4 162 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 NIT1Q86X76 327 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 NPFFR1Q9GZQ6 430 aa9.3□□□□□ -0.92
ITGB1-202ENST00000396033 SH2D1AO60880 128 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 ERCC8Q13216 396 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 NDFIP1Q9BT67 221 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 TRAV8-2A0A0B4J237 113 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 SMAD7O15105 426 aaKnown RBP9.29□□□□□ -0.92
ITGB1-202ENST00000396033 GPX1P07203 203 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 OR10J3Q5JRS4 329 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 PRR31Q5SQ13 230 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 VAMP8Q9BV40 100 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 KMT2BQ9UMN6 2715 aaPredicted RBP9.29□□□□□ -0.92
ITGB1-202ENST00000396033 HOXA3O43365 443 aaPredicted RBP9.29□□□□□ -0.92
ITGB1-202ENST00000396033 PSMB8P28062 276 aa9.29□□□□□ -0.92
ITGB1-202ENST00000396033 C16orf92Q96LL3 132 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 TPPP3Q9BW30 176 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 PEF1Q9UBV8 284 aaKnown RBP9.28□□□□□ -0.92
ITGB1-202ENST00000396033 TMSB15BA0A087X1C1 80 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 TMEM189A5PLL7 270 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 RBAKDNA6NC62 111 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 SPATA45Q537H7 98 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 LAMTOR2Q9Y2Q5 125 aa9.28□□□□□ -0.92
ITGB1-202ENST00000396033 A0A1W2PS18 150 aa9.27□□□□□ -0.92
ITGB1-202ENST00000396033 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.92
ITGB1-202ENST00000396033 WFDC11Q8NEX6 87 aa9.27□□□□□ -0.92
ITGB1-202ENST00000396033 ORAOV1Q8WV07 137 aa9.27□□□□□ -0.92
ITGB1-202ENST00000396033 MRPL53Q96EL3 112 aaKnown RBP9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 293.6 ms