RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 COX19Q49B96 90 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 AMMECR1LQ6DCA0 310 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 OR4B1Q8NGF8 309 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 PSMB11A5LHX3 300 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 S100A4P26447 101 aaKnown RBP11.34□□□□□ -0.59
SREBF1-205ENST00000395757 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
SREBF1-205ENST00000395757 VGLL1Q99990 258 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 TRBV19A0A075B6N1 114 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 FAM181BA6NEQ2 426 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 C19orf84I3L1E1 186 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 TOMM40O96008 361 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 TRGV3P03979 118 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 RPL7P18124 248 aaKnown RBP11.34□□□□□ -0.59
SREBF1-205ENST00000395757 SMIM20Q8N5G0 67 aa11.34□□□□□ -0.59
SREBF1-205ENST00000395757 TM4SF20Q53R12 229 aa11.33□□□□□ -0.59
SREBF1-205ENST00000395757 SHANK2-AS3Q9BTD1 123 aa11.33□□□□□ -0.59
SREBF1-205ENST00000395757 TMEM70Q9BUB7 260 aa11.33□□□□□ -0.59
SREBF1-205ENST00000395757 AP5S1Q9NUS5 200 aa11.33□□□□□ -0.59
SREBF1-205ENST00000395757 ANKRD17O75179 2603 aaKnown RBP11.33□□□□□ -0.6
SREBF1-205ENST00000395757 SIVA1O15304 175 aa11.33□□□□□ -0.6
SREBF1-205ENST00000395757 C16orf92Q96LL3 132 aa11.33□□□□□ -0.6
SREBF1-205ENST00000395757 MAP1LC3CQ9BXW4 147 aa11.33□□□□□ -0.6
SREBF1-205ENST00000395757 TRAV9-1A0A075B6T8 112 aa11.33□□□□□ -0.6
SREBF1-205ENST00000395757 EBLN2Q6P2I7 272 aa11.33□□□□□ -0.6
SREBF1-205ENST00000395757 UTP20O75691 2785 aaKnown RBP11.33□□□□□ -0.6
SREBF1-205ENST00000395757 CUBNO60494 3623 aa11.33□□□□□ -0.6
SREBF1-205ENST00000395757 IGHV2-70DA0A0C4DH43 119 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 D6R8Y8 96 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 Q0VG73 95 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 HIVEP2P31629 2446 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 OR10J3Q5JRS4 329 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 FAM71F2Q6NXP2 309 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 UQCR10Q9UDW1 63 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
SREBF1-205ENST00000395757 TRAV30A0A087WSZ9 112 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 KIR2DL5BA0A0G2JN68 375 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 KIR2DL5BA0A0G2JPC4 375 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 PLP1P60201 277 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 KIR2DL5AQ8N109 375 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 AP1S3Q96PC3 154 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 PRSS1P07477 247 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 NMUP48645 174 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 NAA38Q9BRA0 125 aaKnown RBP11.31□□□□□ -0.6
SREBF1-205ENST00000395757 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 SH2D1AO60880 128 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 MRGPRG-AS1Q2M3A8 158 aa11.31□□□□□ -0.6
SREBF1-205ENST00000395757 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
SREBF1-205ENST00000395757 IFI27P40305 119 aaPredicted RBP11.3□□□□□ -0.6
SREBF1-205ENST00000395757 FCER1GP30273 86 aa11.3□□□□□ -0.6
SREBF1-205ENST00000395757 PSG3Q16557 428 aa11.3□□□□□ -0.6
SREBF1-205ENST00000395757 PRELID3AQ96N28 172 aa11.3□□□□□ -0.6
SREBF1-205ENST00000395757 FANCD2OSQ96PS1 177 aa11.3□□□□□ -0.6
SREBF1-205ENST00000395757 TMEM191AQ9H0A3 160 aa11.3□□□□□ -0.6
SREBF1-205ENST00000395757 M0R381 172 aa11.3□□□□□ -0.6
SREBF1-205ENST00000395757 TNFRSF13BO14836 293 aaPredicted RBP11.3□□□□□ -0.6
SREBF1-205ENST00000395757 PAX2Q02962 417 aa11.3□□□□□ -0.6
SREBF1-205ENST00000395757 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
SREBF1-205ENST00000395757 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 PRB1P04280 392 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 HOXB4P17483 251 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-205ENST00000395757 SPANXN1Q5VSR9 72 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 ZNF414Q96IQ9 312 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
SREBF1-205ENST00000395757 NUDT3O95989 172 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 CRYGCP07315 174 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 TMEM78Q5T7P6 136 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 METTL26Q96S19 204 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 CCL19Q99731 98 aa11.29□□□□□ -0.6
SREBF1-205ENST00000395757 DOPEY1Q5JWR5 2465 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 IGHV7-81A0A0B4J1V7 117 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 H3BUX3 64 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 SIGLEC15Q6ZMC9 328 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 MGPP08493 103 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 IGLL1P15814 213 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 EFNA4P52798 201 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 FAM106AQ4KMX7 169 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 DPF1Q92782 380 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 SIGMAR1Q99720 223 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 H3BRN7 92 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 LTAP01374 205 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
SREBF1-205ENST00000395757 FN1P02751 2386 aaKnown RBP11.27□□□□□ -0.6
SREBF1-205ENST00000395757 GATA1P15976 413 aaPredicted RBP11.27□□□□□ -0.6
SREBF1-205ENST00000395757 ATP5G2Q06055 141 aa11.27□□□□□ -0.6
SREBF1-205ENST00000395757 MBD6Q96DN6 1003 aa11.27□□□□□ -0.6
SREBF1-205ENST00000395757 ZANQ9Y493 2812 aa11.27□□□□□ -0.61
SREBF1-205ENST00000395757 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.61
SREBF1-205ENST00000395757 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
SREBF1-205ENST00000395757 FAM162BQ5T6X4 162 aa11.27□□□□□ -0.61
SREBF1-205ENST00000395757 NPFFO15130 113 aa11.27□□□□□ -0.61
SREBF1-205ENST00000395757 HIST2H2BDQ6DRA6 164 aa11.27□□□□□ -0.61
SREBF1-205ENST00000395757 IL17RELQ6ZVW7 336 aa11.27□□□□□ -0.61
SREBF1-205ENST00000395757 RAB37Q96AX2 223 aa11.27□□□□□ -0.61
SREBF1-205ENST00000395757 CFAP46Q8IYW2 2715 aa11.26□□□□□ -0.61
SREBF1-205ENST00000395757 CRYGBP07316 175 aa11.26□□□□□ -0.61
SREBF1-205ENST00000395757 A0A087X0K7 114 aa11.26□□□□□ -0.61
SREBF1-205ENST00000395757 M0R1W7 72 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms