RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 AGRNO00468 2067 aa12.35□□□□□ -0.43
SMARCD1-202ENST00000394963 SH2D1AO60880 128 aa12.35□□□□□ -0.43
SMARCD1-202ENST00000394963 YPEL3P61236 119 aaPredicted RBP12.35□□□□□ -0.43
SMARCD1-202ENST00000394963 NRN1Q9NPD7 142 aa12.35□□□□□ -0.43
SMARCD1-202ENST00000394963 FAM181BA6NEQ2 426 aa12.35□□□□□ -0.43
SMARCD1-202ENST00000394963 PAX1P15863 534 aa12.35□□□□□ -0.43
SMARCD1-202ENST00000394963 FAM74A4Q5TZK3 123 aa12.35□□□□□ -0.43
SMARCD1-202ENST00000394963 AMN1Q8IY45 258 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 YPEL4Q96NS1 127 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 FAM162BQ5T6X4 162 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 C14orf144Q96I85 54 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 NDUFS8O00217 210 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 IGF2BP2-AS1Q96M15 143 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 UNC79Q9P2D8 2635 aa12.34□□□□□ -0.43
SMARCD1-202ENST00000394963 OR5AL1P0C617 328 aa12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 TMEM249Q2WGJ8 235 aa12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 WIPF2Q8TF74 440 aaPredicted RBP12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 RPLP1P05386 114 aaKnown RBP12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 GNB1LQ9BYB4 327 aa12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 PSMG4Q5JS54 123 aa12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 FER1L6-AS1Q8NA97 138 aa12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 WFDC11Q8NEX6 87 aa12.33□□□□□ -0.44
SMARCD1-202ENST00000394963 HSBP1L1C9JCN9 74 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 H3BVH4 76 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 NDUFS6O75380 124 aaKnown RBP12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 EGR2P11161 476 aaPredicted RBP12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 ZNF502Q8TBZ5 544 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 BMI1P35226 326 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 SRSF2Q01130 221 aaKnown RBP12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 SAPCD1Q5SSQ6 148 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 C8orf86Q6ZUL3 223 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 GTSF1Q8WW33 167 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 MSRB1Q9NZV6 116 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 A0A0G2JLM5 398 aa12.32□□□□□ -0.44
SMARCD1-202ENST00000394963 INS-IGF2F8WCM5 200 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 RAB9AP51151 201 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 NIT1Q86X76 327 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 F8P00451 2351 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 TRBV7-1A0A0A6YYK4 115 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 A0A1W2PS18 150 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 FABP5P3A8MUU1 101 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 EDN2P20800 178 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 DDTP30046 118 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 TDRG1Q3Y452 100 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 DYNLRB2Q8TF09 96 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 PYGO2Q9BRQ0 406 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 ZFP30Q9Y2G7 519 aa12.31□□□□□ -0.44
SMARCD1-202ENST00000394963 SLC25A16P16260 332 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 BTF3P20290 206 aaKnown RBP12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 SRSF8Q9BRL6 282 aaKnown RBP12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 TMEM208Q9BTX3 173 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 PAFAH1B2P68402 229 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 PRSS22Q9GZN4 317 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 FBN2P35556 2912 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 D6R8Y8 96 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 G0S2P27469 103 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 LINC00469Q8N7U9 141 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
SMARCD1-202ENST00000394963 TRAV12-2A0A075B6T6 113 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 FOXE3Q13461 319 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 Q6ZQT7 251 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 PRR25Q96S07 402 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 BUB3O43684 328 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 JOSD1Q15040 202 aaPredicted RBP12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 AJUBAQ96IF1 538 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 LY96Q9Y6Y9 160 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 PRSS1P07477 247 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 ZNF664Q8N3J9 261 aa12.29□□□□□ -0.44
SMARCD1-202ENST00000394963 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 TYMSP04818 313 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 PKIAP61925 76 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 Q6ZN92 141 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 C18orf32Q8TCD1 76 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 LTAP01374 205 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 IGF1P05019 195 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 IGLC2P0DOY2 106 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 Q6ZWC4 215 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
SMARCD1-202ENST00000394963 SMIM27A0A1W2PRY6 76 aa12.27□□□□□ -0.44
SMARCD1-202ENST00000394963 DEFB113Q30KQ7 82 aa12.27□□□□□ -0.44
SMARCD1-202ENST00000394963 GDF5OSQ5U4N7 250 aa12.27□□□□□ -0.44
SMARCD1-202ENST00000394963 AGPAT4-IT1Q9H0P7 198 aa12.27□□□□□ -0.44
SMARCD1-202ENST00000394963 AP5S1Q9NUS5 200 aa12.27□□□□□ -0.44
SMARCD1-202ENST00000394963 TRAV12-3A0A0B4J271 114 aa12.27□□□□□ -0.45
SMARCD1-202ENST00000394963 C20orf202A1L168 122 aa12.27□□□□□ -0.45
SMARCD1-202ENST00000394963 COX19Q49B96 90 aa12.27□□□□□ -0.45
SMARCD1-202ENST00000394963 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.45
SMARCD1-202ENST00000394963 APCP25054 2843 aa12.27□□□□□ -0.45
SMARCD1-202ENST00000394963 TRAV26-2A0A0B4J265 109 aa12.27□□□□□ -0.45
SMARCD1-202ENST00000394963 SMIM17P0DL12 118 aa12.27□□□□□ -0.45
SMARCD1-202ENST00000394963 TRBV9A0A0B4J1U6 114 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 M0QZK8 103 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 SPATA45Q537H7 98 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 VPS13CQ709C8 3753 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 WI2-2373I1.2A0A1W2PRP0 233 aa12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
SMARCD1-202ENST00000394963 PAX2Q02962 417 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms