RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 ERCC8Q13216 396 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 TDRG1Q3Y452 100 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 LBHQ53QV2 105 aaPredicted RBP10.95□□□□□ -0.66
MKS1-203ENST00000393120 C9orf47Q6ZRZ4 202 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 VAMP8Q9BV40 100 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 AGPAT4-IT1Q9H0P7 198 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 KLK15Q9H2R5 256 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 IGHV3-49A0A0A0MS15 119 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 LINC01559Q495D7 138 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 U3KQK5 164 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 USP9XQ93008 2570 aaPredicted RBP10.94□□□□□ -0.66
MKS1-203ENST00000393120 TRBV12-3P01733 135 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 OR5AL1P0C617 328 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 PF4V1P10720 104 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 ZNF138P52744 262 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 PRR31Q5SQ13 230 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 UNQ9165/PRO28630Q6UXU0 137 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 Q6ZS46 218 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 LURAP1LQ8IV03 231 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 FER1L6-AS1Q8NA97 138 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 OR4X2Q8NGF9 303 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 TPPP3Q9BW30 176 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 CNFNQ9BYD5 112 aa10.94□□□□□ -0.66
MKS1-203ENST00000393120 CACNA1BQ00975 2339 aa10.93□□□□□ -0.66
MKS1-203ENST00000393120 TMSB15BA0A087X1C1 80 aa10.93□□□□□ -0.66
MKS1-203ENST00000393120 C2orf70A6NJV1 201 aa10.93□□□□□ -0.66
MKS1-203ENST00000393120 HIST1H1AQ02539 215 aaPredicted RBP10.93□□□□□ -0.66
MKS1-203ENST00000393120 FAM104BQ5XKR9 115 aa10.93□□□□□ -0.66
MKS1-203ENST00000393120 ASH1LQ9NR48 2969 aaKnown RBP10.93□□□□□ -0.66
MKS1-203ENST00000393120 TMEM89A2RUT3 159 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 BTF3P20290 206 aaKnown RBP10.92□□□□□ -0.66
MKS1-203ENST00000393120 PMCHL1Q16048 86 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 DEFB112Q30KQ8 113 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 TMEM78Q5T7P6 136 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 EBLN2Q6P2I7 272 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 MIEN1Q9BRT3 115 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 BEX4Q9NWD9 120 aaPredicted RBP10.92□□□□□ -0.66
MKS1-203ENST00000393120 LENEPQ9Y5L5 61 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 SMAD7O15105 426 aaKnown RBP10.92□□□□□ -0.66
MKS1-203ENST00000393120 CRXO43186 299 aaPredicted RBP10.92□□□□□ -0.66
MKS1-203ENST00000393120 ORM1P02763 201 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 IL17RELQ6ZVW7 336 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 C16orf92Q96LL3 132 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 NPFFR1Q9GZQ6 430 aa10.92□□□□□ -0.66
MKS1-203ENST00000393120 IGHV1-24A0A0C4DH33 117 aa10.91□□□□□ -0.66
MKS1-203ENST00000393120 TMEM213A2RRL7 107 aa10.91□□□□□ -0.66
MKS1-203ENST00000393120 TGFAP01135 160 aa10.91□□□□□ -0.66
MKS1-203ENST00000393120 FSHBP01225 129 aa10.91□□□□□ -0.66
MKS1-203ENST00000393120 LRRC75A-AS1Q8N1F1 130 aa10.91□□□□□ -0.66
MKS1-203ENST00000393120 PAM16Q9Y3D7 125 aa10.91□□□□□ -0.66
MKS1-203ENST00000393120 M0QZ24 198 aa10.9□□□□□ -0.66
MKS1-203ENST00000393120 SOCS3O14543 225 aa10.9□□□□□ -0.66
MKS1-203ENST00000393120 IGHV3-11P01762 117 aa10.9□□□□□ -0.66
MKS1-203ENST00000393120 IGHV4-59P01825 116 aa10.9□□□□□ -0.66
MKS1-203ENST00000393120 MRPL52Q86TS9 123 aaKnown RBP10.9□□□□□ -0.66
MKS1-203ENST00000393120 GPHB5Q86YW7 130 aa10.9□□□□□ -0.66
MKS1-203ENST00000393120 K7EMT4 169 aa10.9□□□□□ -0.67
MKS1-203ENST00000393120 PSMB8P28062 276 aa10.9□□□□□ -0.67
MKS1-203ENST00000393120 LINC00477Q96M19 166 aa10.9□□□□□ -0.67
MKS1-203ENST00000393120 C2orf88Q9BSF0 95 aa10.9□□□□□ -0.67
MKS1-203ENST00000393120 TMEM70Q9BUB7 260 aa10.9□□□□□ -0.67
MKS1-203ENST00000393120 IGHV7-4-1A0A0J9YVY3 117 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 A1L4Q6 167 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 OVOL1O14753 267 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 ORMDL3Q8N138 153 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 TMEM191AQ9H0A3 160 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 PEF1Q9UBV8 284 aaKnown RBP10.89□□□□□ -0.67
MKS1-203ENST00000393120 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 COL12A1Q99715 3063 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 SPG11Q96JI7 2443 aa10.89□□□□□ -0.67
MKS1-203ENST00000393120 FLNCQ14315 2725 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 LEPROTL1O95214 131 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 IGHV4-31P0DP07 118 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 TWIST1Q15672 202 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 AMN1Q8IY45 258 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 DAZ1Q9NQZ3 744 aaKnown RBP10.88□□□□□ -0.67
MKS1-203ENST00000393120 AP5S1Q9NUS5 200 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 C20orf202A1L168 122 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 DEFB113Q30KQ7 82 aa10.88□□□□□ -0.67
MKS1-203ENST00000393120 MRPL51Q4U2R6 128 aaKnown RBP10.88□□□□□ -0.67
MKS1-203ENST00000393120 D6R8Y8 96 aa10.87□□□□□ -0.67
MKS1-203ENST00000393120 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
MKS1-203ENST00000393120 ZNF738Q8NE65 137 aa10.87□□□□□ -0.67
MKS1-203ENST00000393120 PRSS3P2Q8NHM4 247 aa10.87□□□□□ -0.67
MKS1-203ENST00000393120 PRELID3AQ96N28 172 aa10.87□□□□□ -0.67
MKS1-203ENST00000393120 SMPXQ9UHP9 88 aa10.87□□□□□ -0.67
MKS1-203ENST00000393120 HSPB8Q9UJY1 196 aa10.87□□□□□ -0.67
MKS1-203ENST00000393120 SYS1-DBNDD2H3BUS1 97 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 PPBPP02775 128 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 FAM106AQ4KMX7 169 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 SPATA45Q537H7 98 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 Q6YL49 198 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 KLHDC1Q8N7A1 406 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 RHPN1-AS1Q9BWJ2 59 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 C11orf21Q9P2W6 132 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 CSMD1Q96PZ7 3565 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.86□□□□□ -0.675e-7■■■■□ 20.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms