RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 IGHV7-81A0A0B4J1V7 117 aa13.07□□□□□ -0.32
SCN3B-202ENST00000392770 ZNF815PA8K554 130 aa13.07□□□□□ -0.32
SCN3B-202ENST00000392770 TNFRSF6BO95407 300 aa13.07□□□□□ -0.32
SCN3B-202ENST00000392770 KMT2EQ8IZD2 1858 aa13.07□□□□□ -0.32
SCN3B-202ENST00000392770 RPL36AP83881 106 aaKnown RBP13.06□□□□□ -0.32
SCN3B-202ENST00000392770 RPL36ALQ969Q0 106 aaKnown RBP13.06□□□□□ -0.32
SCN3B-202ENST00000392770 ELANEP08246 267 aa13.06□□□□□ -0.32
SCN3B-202ENST00000392770 I3L2K1 104 aa13.06□□□□□ -0.32
SCN3B-202ENST00000392770 CRIP3Q6Q6R5 217 aa13.06□□□□□ -0.32
SCN3B-202ENST00000392770 A0A1B0GUS0 222 aa13.06□□□□□ -0.32
SCN3B-202ENST00000392770 LINC00469Q8N7U9 141 aa13.06□□□□□ -0.32
SCN3B-202ENST00000392770 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
SCN3B-202ENST00000392770 DIDO1Q9BTC0 2240 aaKnown RBP13.06□□□□□ -0.32
SCN3B-202ENST00000392770 K7EN84 100 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 Q8N7P7 452 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 OR9G4Q8NGQ1 327 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 hDV102S1A0JD36 115 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 Q0VG73 95 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 DTX2Q86UW9 622 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 SYS1-DBNDD2H3BUS1 97 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 TMEM95Q3KNT9 176 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 LTAP01374 205 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 POLEQ07864 2286 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
SCN3B-202ENST00000392770 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
SCN3B-202ENST00000392770 PYY3Q5JQD4 70 aa13.04□□□□□ -0.32
SCN3B-202ENST00000392770 PLA2G2EQ9NZK7 142 aa13.04□□□□□ -0.32
SCN3B-202ENST00000392770 HLA-DMBP28068 263 aa13.04□□□□□ -0.32
SCN3B-202ENST00000392770 ANXA2RQ3ZCQ2 193 aa13.04□□□□□ -0.32
SCN3B-202ENST00000392770 FAM104BQ5XKR9 115 aa13.04□□□□□ -0.32
SCN3B-202ENST00000392770 C18orf32Q8TCD1 76 aa13.03□□□□□ -0.32
SCN3B-202ENST00000392770 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
SCN3B-202ENST00000392770 NHP2Q9NX24 153 aaKnown RBP13.03□□□□□ -0.32
SCN3B-202ENST00000392770 PHLDA1Q8WV24 401 aaPredicted RBP13.03□□□□□ -0.32
SCN3B-202ENST00000392770 CRPP02741 224 aa13.02□□□□□ -0.32
SCN3B-202ENST00000392770 K7EIM0 57 aa13.02□□□□□ -0.32
SCN3B-202ENST00000392770 C22orf34Q6ZV56 151 aa13.02□□□□□ -0.32
SCN3B-202ENST00000392770 MCRIP2Q9BUT9 160 aaKnown RBP13.02□□□□□ -0.32
SCN3B-202ENST00000392770 IGLV11-55A0A075B6I3 123 aa13.02□□□□□ -0.33
SCN3B-202ENST00000392770 SLAQ13239 276 aa13.02□□□□□ -0.33
SCN3B-202ENST00000392770 TEX43Q6ZNM6 134 aa13.02□□□□□ -0.33
SCN3B-202ENST00000392770 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
SCN3B-202ENST00000392770 INTS1Q8N201 2190 aaKnown RBP13.02□□□□□ -0.33
SCN3B-202ENST00000392770 PKDREJQ9NTG1 2253 aa13.02□□□□□ -0.33
SCN3B-202ENST00000392770 H3BUT2 72 aa13.02□□□□□ -0.33
SCN3B-202ENST00000392770 IGHV1OR15-1A0A075B7D0 117 aa13.02□□□□□ -0.33
SCN3B-202ENST00000392770 PLNP26678 52 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
SCN3B-202ENST00000392770 SPCS1Q9Y6A9 102 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 IGLV1-47P01700 117 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 Q6ZPA2 131 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 TYMSP04818 313 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 CDKN1BP46527 198 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 Q8N9W7 124 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 TRAV26-2A0A0B4J265 109 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 C5orf56Q8N8D9 126 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 GTF3C1Q12789 2109 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 DNAL4O96015 105 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 ORAOV1Q8WV07 137 aa13.01□□□□□ -0.33
SCN3B-202ENST00000392770 A0A1B0GV72 72 aa13□□□□□ -0.33
SCN3B-202ENST00000392770 MRPL51Q4U2R6 128 aaKnown RBP13□□□□□ -0.33
SCN3B-202ENST00000392770 CACNA1BQ00975 2339 aa13□□□□□ -0.33
SCN3B-202ENST00000392770 NDUFS6O75380 124 aaKnown RBP13□□□□□ -0.33
SCN3B-202ENST00000392770 DYNAPQ8N1N2 210 aa13□□□□□ -0.33
SCN3B-202ENST00000392770 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
SCN3B-202ENST00000392770 TEX22C9J3V5 150 aa13□□□□□ -0.33
SCN3B-202ENST00000392770 TTC32Q5I0X7 151 aa13□□□□□ -0.33
SCN3B-202ENST00000392770 MORN5Q5VZ52 161 aa13□□□□□ -0.33
SCN3B-202ENST00000392770 DEFB130BP0DP73 79 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 DEFB130AP0DP74 79 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 SCGB1A1P11684 91 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 OR5A1Q8NGJ0 315 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 ROS1P08922 2347 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 SIRPDQ9H106 197 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 LGALS1P09382 135 aaKnown RBP12.99□□□□□ -0.33
SCN3B-202ENST00000392770 BLCAPP62952 87 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 HSD52Q0P140 79 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 DEFB121Q5J5C9 76 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 USF3Q68DE3 2245 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 GOLGB1Q14789 3259 aaKnown RBP12.99□□□□□ -0.33
SCN3B-202ENST00000392770 ZGRF1Q86YA3 2104 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 HOXD3P31249 432 aaPredicted RBP12.99□□□□□ -0.33
SCN3B-202ENST00000392770 C19orf84I3L1E1 186 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 GP9P14770 177 aa12.99□□□□□ -0.33
SCN3B-202ENST00000392770 A8MWP6 167 aa12.98□□□□□ -0.33
SCN3B-202ENST00000392770 E7EUB6 86 aa12.98□□□□□ -0.33
SCN3B-202ENST00000392770 CFHR3Q02985 330 aa12.98□□□□□ -0.33
SCN3B-202ENST00000392770 PATE2Q6UY27 113 aa12.98□□□□□ -0.33
SCN3B-202ENST00000392770 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
SCN3B-202ENST00000392770 C11orf68Q9H3H3 251 aaKnown RBP12.98□□□□□ -0.33
SCN3B-202ENST00000392770 MTURNQ8N3F0 131 aa12.98□□□□□ -0.33
SCN3B-202ENST00000392770 TRBV7-9A0A0J9YWB2 115 aa12.97□□□□□ -0.33
SCN3B-202ENST00000392770 Q8N8P6 123 aa12.97□□□□□ -0.33
SCN3B-202ENST00000392770 PCNX3Q9H6A9 2034 aa12.97□□□□□ -0.33
SCN3B-202ENST00000392770 IGHV3-16A0A0C4DH30 117 aa12.97□□□□□ -0.33
SCN3B-202ENST00000392770 RBMY1BA6NDE4 496 aaKnown RBP12.97□□□□□ -0.33
SCN3B-202ENST00000392770 RBMY1EA6NEQ0 496 aaKnown RBP12.97□□□□□ -0.33
SCN3B-202ENST00000392770 F6UB75 175 aa12.97□□□□□ -0.33
SCN3B-202ENST00000392770 RBMY1DP0C7P1 496 aaKnown RBP12.97□□□□□ -0.33
SCN3B-202ENST00000392770 RBMY1A1P0DJD3 496 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms