RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 EXOC3-AS1Q8N2X6 119 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 OR10X1Q8NGY0 326 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 OR10AG1Q8NH19 301 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 SMR3AQ99954 134 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 PLAC8Q9NZF1 115 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 ZFYVE9O95405 1425 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 SHANK2Q9UPX8 1470 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 TET1Q8NFU7 2136 aa0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 SYNE1Q8NF91 8797 aaKnown RBP0.26□□□□□ -2.37
RNU6-48P-201ENST00000384161 HSPG2P98160 4391 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 NESP48681 1621 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 TRPM1Q7Z4N2 1603 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 EHBP1L1Q8N3D4 1523 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 ERCC6Q03468 1493 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 FAM159BA6NKW6 160 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 K7EIL1 84 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 SERPINB9P50453 376 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 FOXA3P55318 350 aaPredicted RBP0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 VBP1P61758 197 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 Q6ZS92 163 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 ATOH7Q8N100 152 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 UCK1Q9HA47 277 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 ARL2BPQ9Y2Y0 163 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 FAM32AQ9Y421 112 aaKnown RBP0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 SPTBP11277 2137 aa0.25□□□□□ -2.37
RNU6-48P-201ENST00000384161 RFX7Q2KHR2 1363 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 CADP27708 2225 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 TMEM256-PLSCR3K7ERE1 68 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 M0R233 179 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 HMGB3O15347 200 aaKnown RBP0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 CST2P09228 141 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 RAB5CP51148 216 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 DYNLT3P51808 116 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 FXYD6P3P58550 94 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 ERVS71-1P61550 626 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 HSPE1P61604 102 aaKnown RBP0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 SPATA45Q537H7 98 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 OR5D16Q8NGK9 328 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 CCDC94Q9BW85 323 aaPredicted RBP0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 NPCDR1Q9BY65 106 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 PRO3102Q9H379 93 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 ENY2Q9NPA8 101 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 RNF11Q9Y3C5 154 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 PTPRDP23468 1912 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 PPRC1Q5VV67 1664 aaKnown RBP0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 DNAH1Q9P2D7 4330 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 CAMSAP1Q5T5Y3 1602 aa0.24□□□□□ -2.37
RNU6-48P-201ENST00000384161 LYSTQ99698 3801 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 BLMP54132 1417 aaPredicted RBP0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 TRAV27A0A087WT01 109 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 A0A0D9SG42 100 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 JMJD7-PLA2G4BH0Y9G9 81 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 M0R378 163 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 AIPO00170 330 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 CST8O60676 142 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 SERPINA1P01009 418 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 CTXN2P0C2S0 81 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 CYBAP13498 195 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 ARPINQ7Z6K5 226 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 MNS1Q8NEH6 495 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 POP5Q969H6 163 aaKnown RBP0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 RAB37Q96AX2 223 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 ZC2HC1AQ96GY0 325 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 TCEAL2Q9H3H9 227 aaPredicted RBP0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 OPTCQ9UBM4 332 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 JPT1Q9UK76 154 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 CMYA5Q8N3K9 4069 aa0.23□□□□□ -2.37
RNU6-48P-201ENST00000384161 MGAMO43451 1857 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 PPYP01298 95 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 SPRR2DP22532 72 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 FADDQ13158 208 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 TAF1AQ15573 450 aaPredicted RBP0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 SCGB2B2Q4G0G5 96 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 C1orf134Q5TEV5 83 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 IFT20Q8IY31 132 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 Q8TAT8 98 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 TOP2BQ02880 1626 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 NISCHQ9Y2I1 1504 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 TRRAPQ9Y4A5 3859 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 PTPRMP28827 1452 aa0.22□□□□□ -2.37
RNU6-48P-201ENST00000384161 MIA2Q96PC5 1412 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 ERBINQ96RT1 1412 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 AKAP9Q99996 3911 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 B4DSR2 109 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 NDUFC2O95298 119 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 IGLV1-51P01701 117 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 C1QBP02746 253 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 IFNA4P05014 189 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 SPRR2EP22531 72 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 SPRR2BP35325 72 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 SPRR2AP35326 72 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 SPINK7P58062 85 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 REEP5Q00765 189 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 PATE2Q6UY27 113 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 HYLS1Q96M11 299 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 C9orf16Q9BUW7 83 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 GGACTQ9BVM4 153 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 WFDC10AQ9H1F0 79 aa0.21□□□□□ -2.38
RNU6-48P-201ENST00000384161 POPDC3Q9HBV1 291 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms