RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PPIFP30405 207 aaKnown RBP8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 BMI1P35226 326 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 ARL3P36405 182 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 CAMPP49913 170 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 LOXL1Q08397 574 aaPredicted RBP8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 RIGQ13278 110 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 LY6EQ16553 131 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 GDF5OSQ5U4N7 250 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 CYB5R2Q6BCY4 276 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 LRRC75A-AS1Q8N1F1 130 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 SIGLECL1Q8N7X8 197 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 C18orf32Q8TCD1 76 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 BORCS7Q96B45 105 aa8.08□□□□□ -1.12
POLR2J3-201ENST00000379340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 A0A0G2JLM5 398 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 A0A1B0GUT8 65 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 GPX1P07203 203 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 CTAG1AP78358 180 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 LCN12Q6JVE5 192 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 PRR25Q96S07 402 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 ALKBH7Q9BT30 221 aaPredicted RBP8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 NAGKQ9UJ70 344 aa8.07□□□□□ -1.12
POLR2J3-201ENST00000379340 IGHV3-35A0A0C4DH35 117 aa8.06□□□□□ -1.12
POLR2J3-201ENST00000379340 TMEM189A5PLL7 270 aa8.06□□□□□ -1.12
POLR2J3-201ENST00000379340 F2Z2F3 143 aa8.06□□□□□ -1.12
POLR2J3-201ENST00000379340 ZNF324O75467 553 aaPredicted RBP8.06□□□□□ -1.12
POLR2J3-201ENST00000379340 SCGB1D1O95968 90 aa8.06□□□□□ -1.12
POLR2J3-201ENST00000379340 APOHP02749 345 aaPredicted RBP8.06□□□□□ -1.12
POLR2J3-201ENST00000379340 C8orf49Q96NF6 230 aa8.06□□□□□ -1.12
POLR2J3-201ENST00000379340 IGKV2-40A0A087WW87 121 aaPredicted RBP8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 A0A1W2PS18 150 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 TMEM89A2RUT3 159 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 SH2D1AO60880 128 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 AVPP01185 164 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 IGKV2D-40P01614 121 aaPredicted RBP8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 IGHG4P01861 327 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 AMTP48728 403 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 CRIP1P50238 77 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 SMAD7O15105 426 aaKnown RBP8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 RAB4AP20338 218 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 CFHR3Q02985 330 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 C9orf139Q6ZV77 190 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 Q6ZWC4 215 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 RCHY1Q96PM5 261 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 SSBP4Q9BWG4 385 aaPredicted RBP8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 PPP1R14DQ9NXH3 145 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 LINC00527Q9UJ94 153 aa8.05□□□□□ -1.12
POLR2J3-201ENST00000379340 IGHV3OR16-8A0A075B7F1 116 aa8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 LOC102724200A0A096LPH7 203 aaPredicted RBP8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 HSBP1O75506 76 aa8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 PF4V1P10720 104 aa8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 ZNF493Q6ZR52 646 aa8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 C8orf86Q6ZUL3 223 aa8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 GLMPQ8WWB7 406 aa8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 CHCHD1Q96BP2 118 aaKnown RBP8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 NRN1Q9NPD7 142 aa8.04□□□□□ -1.12
POLR2J3-201ENST00000379340 FABP5P3A8MUU1 101 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 ZNF705FA8MVS1 300 aaPredicted RBP8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 TGFAP01135 160 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 FSHBP01225 129 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 ZNF705DP0CH99 300 aaPredicted RBP8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 ZNF705BP0CI00 300 aaPredicted RBP8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 PMCHP20382 165 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 HLA-DMBP28068 263 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 DDTP30046 118 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 DEFA6Q01524 100 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 DEFB112Q30KQ8 113 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 ZNF664Q8N3J9 261 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 ASCL2Q99929 193 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 VGLL1Q99990 258 aa8.03□□□□□ -1.12
POLR2J3-201ENST00000379340 TRAV8-2A0A0B4J237 113 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 ARMS2P0C7Q2 107 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 CTRLP40313 264 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 BLCAPP62952 87 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 Q5PR19 223 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 TMEM78Q5T7P6 136 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 TEX43Q6ZNM6 134 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 C9orf47Q6ZRZ4 202 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 OR4X2Q8NGF9 303 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 NPFFR1Q9GZQ6 430 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 LENEPQ9Y5L5 61 aa8.02□□□□□ -1.13
POLR2J3-201ENST00000379340 IGHV3-66A0A0C4DH42 116 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 KIR2DL5BA0A0G2JN68 375 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 KIR2DL5BA0A0G2JPC4 375 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 ZNF207O43670 478 aaKnown RBP8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 ZNF138P52744 262 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 HIST1H1AQ02539 215 aaPredicted RBP8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 LINC01559Q495D7 138 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 IGFL4Q6B9Z1 124 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 NIT1Q86X76 327 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 KIR2DL5AQ8N109 375 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 Q8TAT8 98 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 C16orf92Q96LL3 132 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 Q96MF0 132 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 PRO1933Q9H354 126 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 K7EMT4 169 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 M0R2Z0 102 aa8.01□□□□□ -1.13
POLR2J3-201ENST00000379340 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms