RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NCR2O95944 276 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 RCHY1Q96PM5 261 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 TRAV8-3A0A0A6YYJ7 113 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 MRPL51Q4U2R6 128 aaKnown RBP8.2□□□□□ -1.1
PTCH1-204ENST00000375290 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-204ENST00000375290 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
PTCH1-204ENST00000375290 THBDP07204 575 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 COX6B1P14854 86 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 CELA3AP09093 270 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 MED14OSP0DP75 135 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 EML6Q6ZMW3 1958 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 C9orf172C9J069 976 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 PDE6GP18545 87 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 SPANXB1Q9NS25 103 aaPredicted RBP8.19□□□□□ -1.1
PTCH1-204ENST00000375290 THSD7BQ9C0I4 1608 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 VWCEQ96DN2 955 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 F8WEM9 126 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 J3QQQ9 107 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 MDS2Q8NDY4 140 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 CYYR1Q96J86 154 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 LYPD6Q86Y78 171 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 CFC1P0CG37 223 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 EFNA4P52798 201 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 HAPLN4Q86UW8 402 aa8.19□□□□□ -1.1
PTCH1-204ENST00000375290 G3V4G9 280 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 CACNA1EQ15878 2313 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 PATE3B3GLJ2 98 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 BMPERQ8N8U9 685 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 NDUFA4O00483 81 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 FAM27E3Q08E93 113 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 Q6ZS92 163 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 SDHAF1A6NFY7 115 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 CD59P13987 128 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 FOXG1P55316 489 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-204ENST00000375290 KRTAP27-1Q3LI81 207 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 IGKV1-16P04430 117 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 FER1L5A0AVI2 2057 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 C14orf178Q8N769 122 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-204ENST00000375290 ITLN2Q8WWU7 325 aaPredicted RBP8.18□□□□□ -1.1
PTCH1-204ENST00000375290 TRBV25-1A0A075B6N4 114 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 TGFAP01135 160 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 FGFBP3Q8TAT2 258 aa8.18□□□□□ -1.1
PTCH1-204ENST00000375290 MRPL35Q9NZE8 188 aaKnown RBP8.17□□□□□ -1.1
PTCH1-204ENST00000375290 USF3Q68DE3 2245 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 TRAV3A0A0B4J244 114 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
PTCH1-204ENST00000375290 TRGV4A0A0C4DH28 118 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 IGLC1P0CG04 106 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 NCOR1O75376 2440 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 JMJD7-PLA2G4BH0Y9G9 81 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 C15orf65H3BRN8 121 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 UBE2E1P51965 193 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 TFF2Q03403 129 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 CRYBA4P53673 196 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 CARD19Q96LW7 228 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 SPRR3Q9UBC9 169 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 KIAA1549LQ6ZVL6 1849 aa8.17□□□□□ -1.1
PTCH1-204ENST00000375290 NDUFS7O75251 213 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 CHCHD5Q9BSY4 110 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 IGKV1-39P01597 117 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 IGKV1D-39P04432 117 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 ARTNQ5T4W7 220 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 DMRTC2Q8IXT2 367 aaPredicted RBP8.16□□□□□ -1.1
PTCH1-204ENST00000375290 IMUPQ9GZP8 106 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 IGLV3-9A0A075B6K5 115 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 IGHV3OR16-12A0A075B7B8 117 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 CD33P20138 364 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 RNF138Q8WVD3 245 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 DSCR8Q96T75 97 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 ZDBF2Q9HCK1 2354 aa8.16□□□□□ -1.1
PTCH1-204ENST00000375290 C7orf69Q9H7B7 122 aa8.15□□□□□ -1.1
PTCH1-204ENST00000375290 TIMM17AQ99595 171 aa8.15□□□□□ -1.1
PTCH1-204ENST00000375290 NDUFA12Q9UI09 145 aa8.15□□□□□ -1.1
PTCH1-204ENST00000375290 RNF166Q96A37 237 aaPredicted RBP8.15□□□□□ -1.1
PTCH1-204ENST00000375290 PRSS57Q6UWY2 283 aa8.15□□□□□ -1.1
PTCH1-204ENST00000375290 K7EN84 100 aa8.15□□□□□ -1.11
PTCH1-204ENST00000375290 IGLV1-44P01699 117 aa8.15□□□□□ -1.11
PTCH1-204ENST00000375290 C11orf44Q8N8P7 122 aa8.15□□□□□ -1.11
PTCH1-204ENST00000375290 IGF2BP2-AS1Q96M15 143 aa8.15□□□□□ -1.11
PTCH1-204ENST00000375290 FOXI1Q12951 378 aa8.15□□□□□ -1.11
PTCH1-204ENST00000375290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.14□□□□□ -1.11
PTCH1-204ENST00000375290 ZNF134P52741 427 aa8.14□□□□□ -1.11
PTCH1-204ENST00000375290 PLAURQ03405 335 aa8.14□□□□□ -1.11
PTCH1-204ENST00000375290 IGFL3Q6UXB1 125 aa8.14□□□□□ -1.11
PTCH1-204ENST00000375290 IGLL5B9A064 214 aa8.14□□□□□ -1.11
PTCH1-204ENST00000375290 SPATA25Q9BR10 227 aa8.14□□□□□ -1.11
PTCH1-204ENST00000375290 FOXE3Q13461 319 aa8.14□□□□□ -1.11
PTCH1-204ENST00000375290 ATP5EP2Q5VTU8 51 aa8.14□□□□□ -1.11
PTCH1-204ENST00000375290 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
PTCH1-204ENST00000375290 TEX48A0A1B0GUV7 120 aa8.13□□□□□ -1.11
PTCH1-204ENST00000375290 CITED2Q99967 270 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-204ENST00000375290 ZNF672Q499Z4 452 aaPredicted RBP8.13□□□□□ -1.11
PTCH1-204ENST00000375290 CADP27708 2225 aa8.13□□□□□ -1.11
PTCH1-204ENST00000375290 RHPN1-AS1Q9BWJ2 59 aa8.13□□□□□ -1.11
PTCH1-204ENST00000375290 C15orf53Q8NAA6 179 aa8.13□□□□□ -1.11
PTCH1-204ENST00000375290 SPTBN2O15020 2390 aa8.13□□□□□ -1.11
PTCH1-204ENST00000375290 B4DSR2 109 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms