RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
TMEM50A-201ENST00000374358 GATD1Q8NB37 220 aa12.05□□□□□ -0.48
TMEM50A-201ENST00000374358 ZNF502Q8TBZ5 544 aa12.05□□□□□ -0.48
TMEM50A-201ENST00000374358 CCDC140Q96MF4 163 aa12.05□□□□□ -0.48
TMEM50A-201ENST00000374358 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
TMEM50A-201ENST00000374358 C19orf84I3L1E1 186 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 ORM1P02763 201 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 SFTPCP11686 197 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 Q6AWC8 147 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 WFDC3Q8IUB2 231 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 ZFAND3Q9H8U3 227 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 ST20Q9HBF5 79 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 FLNCQ14315 2725 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 Q6ZQT7 251 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 NPYP01303 97 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 PET117Q6UWS5 81 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 IL17RELQ6ZVW7 336 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 FER1L6-AS1Q8NA97 138 aa12.04□□□□□ -0.48
TMEM50A-201ENST00000374358 OOSP1A8MZH6 123 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 LINC01545Q5VT33 79 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 OR10AG1Q8NH19 301 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 SCRT2Q9NQ03 307 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 PKD1L2Q7Z442 2459 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 A0A087X0K7 114 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 CLPSL1A2RUU4 121 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 HSBP1L1C9JCN9 74 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 BUB3O43684 328 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 NUDT3O95989 172 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 UBE2E1P51965 193 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 SAPCD1Q5SSQ6 148 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 ORMDL3Q8N138 153 aa12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 FAM110DQ8TAY7 271 aaPredicted RBP12.03□□□□□ -0.48
TMEM50A-201ENST00000374358 A0A1B0GW15 77 aa12.02□□□□□ -0.49
TMEM50A-201ENST00000374358 CCL25O15444 150 aa12.02□□□□□ -0.49
TMEM50A-201ENST00000374358 LMO4P61968 165 aa12.02□□□□□ -0.49
TMEM50A-201ENST00000374358 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.02□□□□□ -0.49
TMEM50A-201ENST00000374358 COX11Q9Y6N1 276 aa12.02□□□□□ -0.49
TMEM50A-201ENST00000374358 CKS2P33552 79 aa12.01□□□□□ -0.49
TMEM50A-201ENST00000374358 PRSS57Q6UWY2 283 aa12.01□□□□□ -0.49
TMEM50A-201ENST00000374358 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■□□□ 13.9
TMEM50A-201ENST00000374358 BRD3OSQ6XYD6 125 aa12.01□□□□□ -0.49
TMEM50A-201ENST00000374358 IGLC6P0CF74 106 aa12□□□□□ -0.49
TMEM50A-201ENST00000374358 EFNA4P52798 201 aa12□□□□□ -0.49
TMEM50A-201ENST00000374358 U3KQK5 164 aa12□□□□□ -0.49
TMEM50A-201ENST00000374358 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
TMEM50A-201ENST00000374358 GATA1P15976 413 aaPredicted RBP12□□□□□ -0.49
TMEM50A-201ENST00000374358 EVI2AP22794 236 aa12□□□□□ -0.49
TMEM50A-201ENST00000374358 NHLH1Q02575 133 aa12□□□□□ -0.49
TMEM50A-201ENST00000374358 PSMG3-AS1Q96PY0 264 aa12□□□□□ -0.49
TMEM50A-201ENST00000374358 CACNG7P62955 275 aa11.99□□□□□ -0.49
TMEM50A-201ENST00000374358 C11orf21Q9P2W6 132 aa11.99□□□□□ -0.49
TMEM50A-201ENST00000374358 SELENOKQ9Y6D0 94 aa11.99□□□□□ -0.49
TMEM50A-201ENST00000374358 NPFFO15130 113 aa11.99□□□□□ -0.49
TMEM50A-201ENST00000374358 ANKRD39Q53RE8 183 aa11.99□□□□□ -0.49
TMEM50A-201ENST00000374358 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
TMEM50A-201ENST00000374358 SCGB2A1O75556 95 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 BVES-AS1Q5T3Y7 98 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 C18orf15Q96N68 181 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 CSPG4Q6UVK1 2322 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 BMI1P35226 326 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 PCP4P48539 62 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 ORAOV1Q8WV07 137 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 RNF185Q96GF1 192 aa11.98□□□□□ -0.49
TMEM50A-201ENST00000374358 TRAV8-2A0A0B4J237 113 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 GOSR1O95249 250 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 AGPAT4-IT1Q9H0P7 198 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 IGKV3D-20A0A0C4DH25 116 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 J3KRW8 73 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 DEFB1P60022 68 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 PAX8Q06710 450 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 C5orf56Q8N8D9 126 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 ITLN2Q8WWU7 325 aaPredicted RBP11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 TMEM190Q8WZ59 177 aa11.97□□□□□ -0.49
TMEM50A-201ENST00000374358 FABP5P3A8MUU1 101 aa11.96□□□□□ -0.49
TMEM50A-201ENST00000374358 C2orf91Q6ZV80 131 aa11.96□□□□□ -0.49
TMEM50A-201ENST00000374358 TRBV12-3P01733 135 aa11.96□□□□□ -0.5
TMEM50A-201ENST00000374358 TRGV3P03979 118 aa11.96□□□□□ -0.5
TMEM50A-201ENST00000374358 GNLYP22749 145 aa11.96□□□□□ -0.5
TMEM50A-201ENST00000374358 C8orf86Q6ZUL3 223 aa11.96□□□□□ -0.5
TMEM50A-201ENST00000374358 USP9XQ93008 2570 aaPredicted RBP11.96□□□□□ -0.5
TMEM50A-201ENST00000374358 SPRY2O43597 315 aa11.95□□□□□ -0.5
TMEM50A-201ENST00000374358 CBY3A6NI87 242 aa11.95□□□□□ -0.5
TMEM50A-201ENST00000374358 IGHV4-39P01824 125 aa11.95□□□□□ -0.5
TMEM50A-201ENST00000374358 HBDP02042 147 aa11.95□□□□□ -0.5
TMEM50A-201ENST00000374358 CENPEQ02224 2701 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 TRAV40A0A0B4J280 105 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 TAX1BP3O14907 124 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 IGF1P05019 195 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 EEF1AKMT3Q96AZ1 226 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 COX8AP10176 69 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 PPP1R14DQ9NXH3 145 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 DKK2Q9UBU2 259 aa11.94□□□□□ -0.5
TMEM50A-201ENST00000374358 ZANQ9Y493 2812 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms