RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SHISA9B4DS77 424 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 NDUFA4O00483 81 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 SLAQ13239 276 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 C1QTNF4Q9BXJ3 329 aa9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 ZNF106Q9H2Y7 1883 aaKnown RBP9.44□□□□□ -0.9
DEPDC1-201ENST00000370966 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 RUSC1-AS1Q66K80 236 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 ZNF491Q8N8L2 437 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 CD5LO43866 347 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 TEX43Q6ZNM6 134 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 CHCHD5Q9BSY4 110 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 IGKV3D-20A0A0C4DH25 116 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 C22orf46C9J442 243 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 SAP30O75446 220 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 SYNJ2BPP57105 145 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 ERG28Q9UKR5 140 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 GHRHP01286 108 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 INSP01308 110 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 SFTA2Q6UW10 78 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 LCNL1Q6ZST4 164 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 PYGO2Q9BRQ0 406 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 PRADC1Q9BSG0 188 aa9.43□□□□□ -0.9
DEPDC1-201ENST00000370966 HTN3P15516 51 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 KLHL30-AS1Q8NEE0 82 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 GAGE13Q4V321 117 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 C8orf49Q96NF6 230 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 SELENOKQ9Y6D0 94 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 EML6Q6ZMW3 1958 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 UBE2V1Q13404 147 aa9.42□□□□□ -0.9
DEPDC1-201ENST00000370966 A8MWV9 139 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 TRGV1A0A0A0MS02 117 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 COA6Q5JTJ3 125 aaKnown RBP9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 Q6ZWC4 215 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 RHODO00212 210 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 PAX2Q02962 417 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 Q8N8P6 123 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 PRSS33Q8NF86 280 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 OR11H6Q8NGC7 330 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 COL4A4P53420 1690 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 IGLC2P0DOY2 106 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 IGLC3P0DOY3 106 aa9.41□□□□□ -0.9
DEPDC1-201ENST00000370966 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
DEPDC1-201ENST00000370966 DTX2Q86UW9 622 aa9.4□□□□□ -0.9
DEPDC1-201ENST00000370966 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.9
DEPDC1-201ENST00000370966 MALP21145 153 aa9.4□□□□□ -0.9
DEPDC1-201ENST00000370966 DEFB131AP59861 70 aa9.4□□□□□ -0.9
DEPDC1-201ENST00000370966 J3QLI3 93 aa9.4□□□□□ -0.91
DEPDC1-201ENST00000370966 MRPL51Q4U2R6 128 aaKnown RBP9.4□□□□□ -0.91
DEPDC1-201ENST00000370966 TMEM86BQ8N661 226 aa9.4□□□□□ -0.91
DEPDC1-201ENST00000370966 MCRIP2Q9BUT9 160 aaKnown RBP9.4□□□□□ -0.91
DEPDC1-201ENST00000370966 A0A087WWL8 130 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 LTAP01374 205 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 ZC2HC1AQ96GY0 325 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 SIGMAR1Q99720 223 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 PLA2G2EQ9NZK7 142 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 OTOGLQ3ZCN5 2332 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 NSUN5P1Q3KNT7 163 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 LY6G5BQ8NDX9 201 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 OBSL1O75147 1896 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 CSPG4Q6UVK1 2322 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 IGHV3-64A0A075B6Q5 118 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 TSPAN13O95857 204 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 SP5Q6BEB4 398 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 WIPF2Q8TF74 440 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 RASL10AQ92737 203 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 A0A1W2PNU3 283 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 H3BUA1 57 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 K7EN84 100 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 M0R2P5 195 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 KIR3DS1Q14943 382 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 C2orf66Q6UXQ4 117 aa9.39□□□□□ -0.91
DEPDC1-201ENST00000370966 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 PRSS57Q6UWY2 283 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 STPG4Q8N801 248 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 PCDH15Q96QU1 1955 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 LGALS9BQ3B8N2 356 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 LGALS9CQ6DKI2 356 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 A0A087WX48 190 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
DEPDC1-201ENST00000370966 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
DEPDC1-201ENST00000370966 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
DEPDC1-201ENST00000370966 CR1LQ2VPA4 569 aa9.37□□□□□ -0.91
DEPDC1-201ENST00000370966 NAA38Q9BRA0 125 aaKnown RBP9.37□□□□□ -0.91
DEPDC1-201ENST00000370966 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
DEPDC1-201ENST00000370966 COX11Q9Y6N1 276 aa9.37□□□□□ -0.91
DEPDC1-201ENST00000370966 ESDP10768 282 aa9.37□□□□□ -0.91
DEPDC1-201ENST00000370966 INS-IGF2F8WCM5 200 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 A0A0U1RRA0 63 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 SSBP2P81877 361 aaPredicted RBP9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 GAGE1Q13065 139 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 ATXN8Q156A1 80 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 SEM1Q6ZVN7 128 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 TMEM141Q96I45 108 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 SIGLEC8Q9NYZ4 499 aa9.36□□□□□ -0.91
DEPDC1-201ENST00000370966 IGHV1OR15-1A0A075B7D0 117 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms