RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 IGF2BP2-AS1Q96M15 143 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 SLC25A33Q9BSK2 321 aa7.86□□□□□ -1.15
PRPF38B-203ENST00000370025 TCRBV4S1A1TA0A5B7 111 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 CRYGCP07315 174 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 THAP8Q8NA92 274 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 NHP2Q9NX24 153 aaKnown RBP7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 ZFYVE26Q68DK2 2539 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 TMEM238LA0A1B0GVL6 79 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 SAA4P35542 130 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 DSCR9P59020 149 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 SSBP2P81877 361 aaPredicted RBP7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 LOXL1Q08397 574 aaPredicted RBP7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 FA2HQ7L5A8 372 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 AP5S1Q9NUS5 200 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 USP9XQ93008 2570 aaPredicted RBP7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 IGHV3OR16-13A0A075B7E8 117 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 IGHV3-74A0A0B4J1X5 117 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 H3BMG7 143 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 H3BRM9 83 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 J3KRW8 73 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 PEX7O00628 323 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 NPFFO15130 113 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 P01737 135 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 PAX8Q06710 450 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 C10orf113Q5VZT2 155 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 GTSF1Q8WW33 167 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 PAXXQ9BUH6 204 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 MYO18BQ8IUG5 2567 aa7.85□□□□□ -1.15
PRPF38B-203ENST00000370025 MYO9AB2RTY4 2548 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 IGHV3-23P01764 117 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 C8orf88P0DMB2 117 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 ZNF562Q6V9R5 426 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 Q8N6K4 173 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 MRPL32Q9BYC8 188 aaKnown RBP7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 ZNF462Q96JM2 2506 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 IGHV4-30-2A0A087WSY4 118 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 KLF5Q13887 457 aaPredicted RBP7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 PRNTQ86SH4 94 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 GEMIN7Q9H840 131 aaKnown RBP7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 SS18L2Q9UHA2 77 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 SRSF1Q07955 248 aaKnown RBP eCLIP7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 PET117Q6UWS5 81 aa7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 MRPL36Q9P0J6 103 aaKnown RBP7.84□□□□□ -1.15
PRPF38B-203ENST00000370025 CENPVL3A0A0U1RRI6 287 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 ANXA2RQ3ZCQ2 193 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 TRGV9Q99603 122 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 IGKV1D-37A0A075B6S9 117 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 GATA3P23771 443 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 COL8A1P27658 744 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 FXYD2P54710 66 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 IFI27P40305 119 aaPredicted RBP7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 CD300EQ496F6 205 aaPredicted RBP7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 LINC00305Q7Z4B0 112 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 BCL6BQ8N143 479 aaPredicted RBP7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 CIARTQ8N365 385 aaPredicted RBP7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 FLNCQ14315 2725 aa7.83□□□□□ -1.16
PRPF38B-203ENST00000370025 AGRNO00468 2067 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 CRXO43186 299 aaPredicted RBP7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 NRGNQ92686 78 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 RASL11BQ9BPW5 248 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 MS4A6AQ9H2W1 248 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 IGKV3-7A0A075B6H7 116 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 SMIM13P0DJ93 91 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 AJUBAQ96IF1 538 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 USP9YO00507 2555 aaPredicted RBP7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 IGHV1-69DA0A0B4J2H0 117 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 LTAP01374 205 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 IGHV1-69P01742 117 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 PIP4P2Q8N4L2 257 aa7.82□□□□□ -1.16
PRPF38B-203ENST00000370025 PSMB11A5LHX3 300 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 I3L2K1 104 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 OR2J3O76001 311 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 MSMBP08118 114 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 SLC25A16P16260 332 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 CHCHD1Q96BP2 118 aaKnown RBP7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 RPP21Q9H633 154 aaKnown RBP7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 ASH1LQ9NR48 2969 aaKnown RBP7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 SONP18583 2426 aaKnown RBP7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 NPIPB5A8MRT5 1133 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 CSN1S1P47710 185 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 KLF17Q5JT82 389 aaPredicted RBP7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 Q8N9W7 124 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 SPAG8Q99932 426 aaPredicted RBP7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 C20orf78Q9BR46 151 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 ZNF747Q9BV97 191 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 SLC25A2Q9BXI2 301 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 IGHV3-49A0A0A0MS15 119 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 GOLT1AQ6ZVE7 132 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 ZNF329Q86UD4 541 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 OR5A1Q8NGJ0 315 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 DKK2Q9UBU2 259 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 WNK1Q9H4A3 2382 aa7.81□□□□□ -1.16
PRPF38B-203ENST00000370025 IGHV3OR16-10A0A075B7F0 116 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 B4DSR2 109 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 SMAD7O15105 426 aaKnown RBP7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 ARMS2P0C7Q2 107 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 LINC01545Q5VT33 79 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 RUSC1-AS1Q66K80 236 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 TTC9CQ8N5M4 171 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 WIPF2Q8TF74 440 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms