RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 Q96MF0 132 aa4.19□□□□□ -1.74
SMNDC1-202ENST00000369603 CEP295Q9C0D2 2601 aa4.19□□□□□ -1.74
SMNDC1-202ENST00000369603 TRANK1O15050 2925 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 TRGV11A0A075B6L2 103 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 C7orf71A4D174 169 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 LTAP01374 205 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 ELANEP08246 267 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 CD7P09564 240 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 GP9P14770 177 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 LMO4P61968 165 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 UTF1Q5T230 341 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 C1orf229Q6ZS94 237 aaPredicted RBP4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 ZNF502Q8TBZ5 544 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 E7EUB6 86 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 SCGB1D4Q6XE38 83 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 GLMPQ8WWB7 406 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 MRPL53Q96EL3 112 aaKnown RBP4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 DUX3Q96PT4 197 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 PRR25Q96S07 402 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 HCFC1P51610 2035 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 DEFB113Q30KQ7 82 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 C18orf32Q8TCD1 76 aa4.18□□□□□ -1.74
SMNDC1-202ENST00000369603 A0A087X0K7 114 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 TNFRSF13BO14836 293 aaPredicted RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 PLA2G5P39877 138 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 PAX2Q02962 417 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 C8orf86Q6ZUL3 223 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 C5orf56Q8N8D9 126 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 RCHY1Q96PM5 261 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 VPREB3Q9UKI3 123 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 SPCS1Q9Y6A9 102 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 LY6LH3BQJ8 138 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 H3BVH4 76 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 K7EN84 100 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 CTSGP08311 255 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 ZNF688P0C7X2 276 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 SRSF1Q07955 248 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 ORMDL2Q53FV1 153 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 LYRM7Q5U5X0 104 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 IGFL4Q6B9Z1 124 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 NAA38Q9BRA0 125 aaKnown RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 ANKRD11Q6UB99 2663 aaPredicted RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 IGHV3OR16-12A0A075B7B8 117 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 WI2-2373I1.2A0A1W2PRP0 233 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 RBAKDNA6NC62 111 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 CIDEAO60543 219 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 CRYGBP07316 175 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 PPIFP30405 207 aaKnown RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 MAJINQ3KP22 176 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 IL17RELQ6ZVW7 336 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 WIPF2Q8TF74 440 aaPredicted RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 MCRIP2Q9BUT9 160 aaKnown RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 CST9LQ9H4G1 147 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 ATRXP46100 2492 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 D6R8Y8 96 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 SYS1-DBNDD2H3BUS1 97 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 CCL25O15444 150 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 IGLL1P15814 213 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 SRD5A1P18405 259 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 EBI3Q14213 229 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 DEFB112Q30KQ8 113 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 OCIAD2Q56VL3 154 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 STHQ8IWL8 128 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 RNASE8Q8TDE3 154 aaKnown RBP4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 CFHR4Q92496 578 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 LINC01587Q99440 93 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 LENEPQ9Y5L5 61 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 TNFRSF18Q9Y5U5 241 aa4.17□□□□□ -1.74
SMNDC1-202ENST00000369603 IGHV7-4-1A0A0J9YVY3 117 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 A0A1W2PRX2 142 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 GAGE12BA1L429 117 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 C19orf84I3L1E1 186 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 ARMS2P0C7Q2 107 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 IGHV4-38-2P0DP08 117 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 SYNJ2BPP57105 145 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 SLAQ13239 276 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 MAPK1IP1LQ8NDC0 245 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 KLHL30-AS1Q8NEE0 82 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 OR2K2Q8NGT1 345 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 SCGB3A1Q96QR1 104 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 DPH3P1Q9H4G8 78 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 MRPL36Q9P0J6 103 aaKnown RBP4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 KLF12Q9Y4X4 402 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 IGKV1D-37A0A075B6S9 117 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 FCN3O75636 299 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 SMIM13P0DJ93 91 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 SCGB1C2P0DMR2 95 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 ERCC8Q13216 396 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 SRSF9Q13242 221 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 MORN5Q5VZ52 161 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 C18orf15Q96N68 181 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 PRB1P04280 392 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 SEC11AP67812 179 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 LCNL1Q6ZST4 164 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 RNF182Q8N6D2 247 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 ZC2HC1AQ96GY0 325 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 IGF2BP2-AS1Q96M15 143 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 FANCD2OSQ96PS1 177 aa4.16□□□□□ -1.74
SMNDC1-202ENST00000369603 KLK15Q9H2R5 256 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms