RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SIGLEC8Q9NYZ4 499 aa11.52□□□□□ -0.57
PRKN-204ENST00000366896 THYN1Q9P016 225 aa11.52□□□□□ -0.57
PRKN-204ENST00000366896 LRBAP50851 2863 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 SERTM2A0A1B0GWG4 89 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 A0A1W2PPM0 123 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 NPBQ8NG41 125 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 WI2-2373I1.2A0A1W2PRP0 233 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 CIDEAO60543 219 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 NDUFA3O95167 84 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 CACNG7P62955 275 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 PSG3Q16557 428 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 S4R3C0 116 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 CSMD1Q96PZ7 3565 aa11.51□□□□□ -0.57
PRKN-204ENST00000366896 TIMM23O14925 209 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 OR11H6Q8NGC7 330 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 ONECUT1Q9UBC0 465 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 PSG8Q9UQ74 426 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 SPCS1Q9Y6A9 102 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 U3KQK5 164 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 CNIH1O95406 144 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 SMIM17P0DL12 118 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 COX8CQ7Z4L0 72 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 RAB37Q96AX2 223 aa11.5□□□□□ -0.57
PRKN-204ENST00000366896 D6R8Y8 96 aa11.49□□□□□ -0.57
PRKN-204ENST00000366896 CRIP1P50238 77 aa11.49□□□□□ -0.57
PRKN-204ENST00000366896 ZNF414Q96IQ9 312 aa11.49□□□□□ -0.57
PRKN-204ENST00000366896 LOC389332A0A1B0GUA5 103 aa11.49□□□□□ -0.57
PRKN-204ENST00000366896 NBR2O15453 112 aa11.49□□□□□ -0.57
PRKN-204ENST00000366896 PAX8Q06710 450 aa11.49□□□□□ -0.57
PRKN-204ENST00000366896 KLF17Q5JT82 389 aaPredicted RBP11.49□□□□□ -0.57
PRKN-204ENST00000366896 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
PRKN-204ENST00000366896 DPM3Q9P2X0 92 aa11.49□□□□□ -0.57
PRKN-204ENST00000366896 FBLL1A6NHQ2 334 aaKnown RBP11.48□□□□□ -0.57
PRKN-204ENST00000366896 LY6HO94772 140 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 CFHR4Q92496 578 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 PRELID3AQ96N28 172 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 AKAP6Q13023 2319 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 HBDP02042 147 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 TCTAP57738 103 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 PCP2Q8IVA1 136 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 TPPP3Q9BW30 176 aa11.48□□□□□ -0.57
PRKN-204ENST00000366896 NPIPB5A8MRT5 1133 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 TMEM11P17152 192 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 CCL19Q99731 98 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 GCN1Q92616 2671 aaKnown RBP11.47□□□□□ -0.57
PRKN-204ENST00000366896 M0R3E3 92 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 IL4P05112 153 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 ORMDL3Q8N138 153 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
PRKN-204ENST00000366896 M0R1W7 72 aa11.46□□□□□ -0.57
PRKN-204ENST00000366896 NDUFS7O75251 213 aa11.46□□□□□ -0.57
PRKN-204ENST00000366896 FABP2P12104 132 aa11.46□□□□□ -0.57
PRKN-204ENST00000366896 KLRD1Q13241 179 aa11.46□□□□□ -0.57
PRKN-204ENST00000366896 HIST2H2BCQ6DN03 193 aa11.46□□□□□ -0.57
PRKN-204ENST00000366896 IGLV11-55A0A075B6I3 123 aa11.46□□□□□ -0.58
PRKN-204ENST00000366896 NMUP48645 174 aa11.46□□□□□ -0.58
PRKN-204ENST00000366896 PRSS57Q6UWY2 283 aa11.46□□□□□ -0.58
PRKN-204ENST00000366896 AMN1Q8IY45 258 aa11.46□□□□□ -0.58
PRKN-204ENST00000366896 NRGNQ92686 78 aa11.46□□□□□ -0.58
PRKN-204ENST00000366896 TMEM213A2RRL7 107 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 ODF3BA8MYP8 253 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 CT45A10P0DMU9 189 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 MFAP4P55083 255 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 FXYD7P58549 80 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 PIFOQ8TCI5 191 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 AAMDCQ9H7C9 122 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 CRYBG3Q68DQ2 2970 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 ARHGAP32A7KAX9 2087 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 A0A1W2PRD5 423 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 A0A1W2PRF3 423 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 A0A1W2PRM7 423 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 FCGR2BP31994 310 aaPredicted RBP11.45□□□□□ -0.58
PRKN-204ENST00000366896 EFNA4P52798 201 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 KRTAP10-9P60411 292 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 C5orf64Q2M2E5 130 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 SAMD5Q5TGI4 173 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 C8orf49Q96NF6 230 aa11.45□□□□□ -0.58
PRKN-204ENST00000366896 MRPL51Q4U2R6 128 aaKnown RBP11.44□□□□□ -0.58
PRKN-204ENST00000366896 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
PRKN-204ENST00000366896 FANCD2OSQ96PS1 177 aa11.44□□□□□ -0.58
PRKN-204ENST00000366896 GNG7O60262 68 aa11.44□□□□□ -0.58
PRKN-204ENST00000366896 SMIM13P0DJ93 91 aa11.44□□□□□ -0.58
PRKN-204ENST00000366896 CLEC2AQ6UVW9 174 aa11.44□□□□□ -0.58
PRKN-204ENST00000366896 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
PRKN-204ENST00000366896 FASNP49327 2511 aaKnown RBP11.43□□□□□ -0.58
PRKN-204ENST00000366896 TMEM189A5PLL7 270 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 PRTN3P24158 256 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 SAMD13Q5VXD3 122 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 DKK2Q9UBU2 259 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 FBN2P35556 2912 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 IGHV4-39P01824 125 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 HIGD1BQ9P298 99 aa11.43□□□□□ -0.58
PRKN-204ENST00000366896 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
PRKN-204ENST00000366896 SRSF2Q01130 221 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms