RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 RNASE3P12724 160 aaKnown RBP0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 NFYAP23511 347 aaPredicted RBP0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 CD40LGP29965 261 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 MIPP30301 263 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 LCN1P31025 176 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 GLRXP35754 106 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 RPL30P62888 115 aaKnown RBP0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 BTG2P78543 158 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 HLA-DRB3P79483 266 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 KRTAP6-2Q3LI66 62 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 TDRG1Q3Y452 100 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 FAM45BPQ6NSW5 357 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 DHFR2Q86XF0 187 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 GPHB5Q86YW7 130 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 TBC1D19Q8N5T2 526 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 C9orf163Q8N9P6 203 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 OR10D3Q8NH80 312 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 AQP3Q92482 292 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 PPCDCQ96CD2 204 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 CMTM5Q96DZ9 223 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 ANKRD36BP1Q96IX9 119 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 SIKE1Q9BRV8 207 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 TIPINQ9BVW5 301 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 YIPF3Q9GZM5 350 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 IMUPQ9GZP8 106 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 TVP23BQ9NYZ1 205 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 POFUT2Q9Y2G5 429 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 LHFPL6Q9Y693 200 aa0.14□□□□□ -2.39
RNU4-41P-201ENST00000364426 LOC100506127A0A0U1RQW1 187 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 COX7A2LO14548 114 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 APOMO95445 188 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 ATP6V1G2O95670 118 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 PMP2P02689 132 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 IL6P05231 212 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 S100A9P06702 114 aaKnown RBP0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 HTN3P15516 51 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 SYT1P21579 422 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 GRPRP30550 384 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 UBE2D1P51668 147 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 ESRGQ1W209 222 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 HLA-DRB5Q30154 266 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 Q3ZCU0 254 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 SPATA8Q6RVD6 105 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 TAC4Q86UU9 113 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 TRAPPC5Q8IUR0 188 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 CNPY4Q8N129 248 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 LINC00471Q8N535 108 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 ZNF676Q8N7Q3 588 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 OR4B1Q8NGF8 309 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 ITFG2Q969R8 447 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 GNPNAT1Q96EK6 184 aaPredicted RBP0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 LINC00526Q96FQ7 95 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 LYSMD1Q96S90 227 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 CCL13Q99616 98 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 NSRP1Q9H0G5 558 aaKnown RBP0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 HES4Q9HCC6 221 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 C1orf109Q9NX04 203 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 PAQR5Q9NXK6 330 aaPredicted RBP0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 TIMM22Q9Y584 194 aa0.13□□□□□ -2.39
RNU4-41P-201ENST00000364426 TMED7-TICAM2A0A0A6YYA0 188 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 IRGMA1A4Y4 181 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 AZIN1O14977 448 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 SULT1A3P0DMM9 295 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 SULT1A4P0DMN0 295 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 HIST1H1CP16403 213 aaKnown RBP0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 CXCL2P19875 107 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 CXCL3P19876 107 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 KDELR2P33947 212 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 CSN1S1P47710 185 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 FXYD2P54710 66 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 MT1XP80297 61 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 KRTAP19-7Q3SYF9 63 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 C5orf46Q6UWT4 87 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 AAED1Q7RTV5 226 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 TMEM161BQ8NDZ6 487 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 ASB13Q8WXK3 278 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 ZNF75CPQ92670 426 aaPredicted RBP0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 OBSCN-AS1Q96MR7 158 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 ERMAPQ96PL5 475 aaPredicted RBP0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 CXorf21Q9HAI6 301 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 CHMP5Q9NZZ3 219 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 RSL24D1Q9UHA3 163 aaKnown RBP0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 DKKL1Q9UK85 242 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 BAIAP2Q9UQB8 552 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 PRELID1Q9Y255 219 aa0.12□□□□□ -2.39
RNU4-41P-201ENST00000364426 LOC110117498A0A087WWA1 95 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 TRAV5A0A0B4J249 113 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 H0YAA0 97 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 M0QZK8 103 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 LEPROTO15243 131 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 OR5F1O95221 314 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 SPART-AS1P0CW21 52 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 DDTP30046 118 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 BRS3P32247 399 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 EIF2B2P49770 351 aaKnown RBP0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 POLR2GP62487 172 aaKnown RBP eCLIP0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 ZNF345Q14585 488 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 ZNF846Q147U1 533 aa0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 JOSD1Q15040 202 aaPredicted RBP0.11□□□□□ -2.39
RNU4-41P-201ENST00000364426 ALX1Q15699 326 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms