RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 IGFL3Q6UXB1 125 aa7.96□□□□□ -1.14
RNF40-202ENST00000357890 LYPD2Q6UXB3 125 aa7.96□□□□□ -1.14
RNF40-202ENST00000357890 ANKHD1Q8IWZ3 2542 aaKnown RBP7.95□□□□□ -1.14
RNF40-202ENST00000357890 MGPP08493 103 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 LGALS9BQ3B8N2 356 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 LGALS9CQ6DKI2 356 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 BOD1L2Q8IYS8 172 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 TMEM158Q8WZ71 300 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 FAM167A-AS1Q96KT0 104 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 TLN1Q9Y490 2541 aaKnown RBP7.95□□□□□ -1.14
RNF40-202ENST00000357890 SCGB1A1P11684 91 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 IGFL4Q6B9Z1 124 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 IGF2-ASQ6U949 168 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 NEGR1Q7Z3B1 354 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 NUP37Q8NFH4 326 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 PTH2Q96A98 100 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 RNF183Q96D59 192 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 OTORQ9NRC9 128 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 RAXQ9Y2V3 346 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 TRBV25-1A0A075B6N4 114 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 LYNX1G3V0Z9 82 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 NDUFS7O75251 213 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 NPYP01303 97 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 LYNX1P0DP58 116 aa7.95□□□□□ -1.14
RNF40-202ENST00000357890 IGLL5B9A064 214 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 CEACAM4O75871 244 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 TEX36Q5VZQ5 186 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 UFSP1Q6NVU6 142 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 SVIPQ8NHG7 77 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 IGKV2-40A0A087WW87 121 aaPredicted RBP7.94□□□□□ -1.14
RNF40-202ENST00000357890 A0A1B0GW15 77 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 IGKV2D-40P01614 121 aaPredicted RBP7.94□□□□□ -1.14
RNF40-202ENST00000357890 IGHV3-23P01764 117 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 C12orf74Q32Q52 190 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 ZNF833PQ6ZTB9 187 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 ADIPOQQ15848 244 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 PATE2Q6UY27 113 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 C8orf86Q6ZUL3 223 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 CEND1Q8N111 149 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 C3orf56Q8N813 242 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 DLX4Q92988 240 aaPredicted RBP7.94□□□□□ -1.14
RNF40-202ENST00000357890 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 DSCAMO60469 2012 aa7.94□□□□□ -1.14
RNF40-202ENST00000357890 CEP295Q9C0D2 2601 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 A0A1B0GXF2 115 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 PRSS29PA6NIE9 313 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 RPL11P62913 178 aaKnown RBP7.93□□□□□ -1.14
RNF40-202ENST00000357890 MRPL51Q4U2R6 128 aaKnown RBP7.93□□□□□ -1.14
RNF40-202ENST00000357890 PPP1R27Q86WC6 154 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 MRPL36Q9P0J6 103 aaKnown RBP7.93□□□□□ -1.14
RNF40-202ENST00000357890 A8MWV9 139 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 TMEM178BH3BS89 294 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 HAX1O00165 279 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 MT-ATP8P03928 68 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 FOXI2Q6ZQN5 318 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 CACNA1AO00555 2505 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 ZNF815PA8K554 130 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 CRXO43186 299 aaPredicted RBP7.93□□□□□ -1.14
RNF40-202ENST00000357890 CNTFRP26992 372 aa7.93□□□□□ -1.14
RNF40-202ENST00000357890 CD3EP07766 207 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 C8orf46Q8TAG6 207 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 SPANXB1Q9NS25 103 aaPredicted RBP7.92□□□□□ -1.14
RNF40-202ENST00000357890 MRPL35Q9NZE8 188 aaKnown RBP7.92□□□□□ -1.14
RNF40-202ENST00000357890 TET2Q6N021 2002 aaPredicted RBP7.92□□□□□ -1.14
RNF40-202ENST00000357890 C17orf77Q96MU5 243 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 TMEM133Q9H2Q1 129 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 A0A0G2JNJ9 132 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 F5H697 171 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 ATP5LO75964 103 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 FAM104BQ5XKR9 115 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 Q6AWC8 147 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 RNASE6Q93091 150 aaKnown RBP7.92□□□□□ -1.14
RNF40-202ENST00000357890 SCGB3A1Q96QR1 104 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 Q9UFV3 132 aa7.92□□□□□ -1.14
RNF40-202ENST00000357890 IGKV3-7A0A075B6H7 116 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 IGHV3-49A0A0A0MS15 119 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 IGHV3-66A0A0C4DH42 116 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 FAM90A27PA6NNH2 459 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 IGHV1-8P0DP01 117 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 ABHD17AQ96GS6 310 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 SLC25A39Q9BZJ4 359 aaPredicted RBP7.91□□□□□ -1.14
RNF40-202ENST00000357890 GFRA4Q9GZZ7 299 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 IGHV4-39P01824 125 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 PRSS2P07478 247 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 GATA1P15976 413 aaPredicted RBP7.91□□□□□ -1.14
RNF40-202ENST00000357890 UCNP55089 124 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 CT83Q5H943 113 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 C22orf34Q6ZV56 151 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 TMEM75Q8N9X5 138 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 RITA1Q96K30 269 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 ZNF492Q9P255 531 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 SH2D1AO60880 128 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 RAX2Q96IS3 184 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 LINC00574Q9H8X3 128 aa7.91□□□□□ -1.14
RNF40-202ENST00000357890 HERV-K104P63124 156 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms