RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 SMKR1H3BMG3 65 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 PPP1R2P9O14990 202 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 DSCR9P59020 149 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 PYY3Q5JQD4 70 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 PRR9Q5T870 116 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 GPHB5Q86YW7 130 aa10.57□□□□□ -0.72
LSS-201ENST00000356396 ZNF331Q9NQX6 463 aaPredicted RBP10.57□□□□□ -0.72
LSS-201ENST00000356396 S100A2P29034 98 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 C19orf54Q5BKX5 351 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 TCTEX1D4Q5JR98 221 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 Q6YL49 198 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 TMEM242Q9NWH2 141 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 TRAV12-2A0A075B6T6 113 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 H0Y8G0 127 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 FABP1P07148 127 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 RPL7P18124 248 aaKnown RBP10.56□□□□□ -0.72
LSS-201ENST00000356396 NTF3P20783 257 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 TCTAP57738 103 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 PSG3Q16557 428 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 MLST8Q9BVC4 326 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 PRO1933Q9H354 126 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 SERTM2A0A1B0GWG4 89 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 LTAP01374 205 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 PMCHP20382 165 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 KRTAP1-1Q07627 177 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 HIST3H2BBQ8N257 126 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 ZNF738Q8NE65 137 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
LSS-201ENST00000356396 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 C11orf21Q9P2W6 132 aa10.56□□□□□ -0.72
LSS-201ENST00000356396 DNAJC9-AS1A6NH13 148 aa10.55□□□□□ -0.72
LSS-201ENST00000356396 ACTL10Q5JWF8 245 aa10.55□□□□□ -0.72
LSS-201ENST00000356396 KLHDC1Q8N7A1 406 aa10.55□□□□□ -0.72
LSS-201ENST00000356396 VN1R17PQ8TDU5 208 aa10.55□□□□□ -0.72
LSS-201ENST00000356396 GSN-AS1Q9NRJ2 163 aa10.55□□□□□ -0.72
LSS-201ENST00000356396 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
LSS-201ENST00000356396 MBD6Q96DN6 1003 aa10.55□□□□□ -0.72
LSS-201ENST00000356396 SERF1AO75920 110 aa10.54□□□□□ -0.72
LSS-201ENST00000356396 LINC00310P59036 64 aa10.54□□□□□ -0.72
LSS-201ENST00000356396 HIST1H2BLQ99880 126 aa10.54□□□□□ -0.72
LSS-201ENST00000356396 PYGO2Q9BRQ0 406 aa10.54□□□□□ -0.72
LSS-201ENST00000356396 TRBV7-1A0A0A6YYK4 115 aa10.54□□□□□ -0.72
LSS-201ENST00000356396 SH2D1AO60880 128 aa10.54□□□□□ -0.72
LSS-201ENST00000356396 PSMB8P28062 276 aa10.54□□□□□ -0.72
LSS-201ENST00000356396 UBE2CO00762 179 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 NCR2O95944 276 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 HOXA5P20719 270 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 CSN1S1P47710 185 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 BAGE3Q86Y29 109 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 OR11H1Q8NG94 326 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 LOC389332A0A1B0GUA5 103 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 INAFM1C9JVW0 142 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 AMBPP02760 352 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 OR4B1Q8NGF8 309 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 TXNDC17Q9BRA2 123 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 PEF1Q9UBV8 284 aaKnown RBP10.53□□□□□ -0.72
LSS-201ENST00000356396 IGLV1-40P01703 118 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 TAS2R60P59551 318 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 FOXL1Q12952 345 aa10.53□□□□□ -0.72
LSS-201ENST00000356396 RPP21Q9H633 154 aaKnown RBP10.53□□□□□ -0.72
LSS-201ENST00000356396 SMIM6P0DI80 62 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 HOXD3P31249 432 aaPredicted RBP10.52□□□□□ -0.73
LSS-201ENST00000356396 Q6ZSV7 163 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 ATOH7Q8N100 152 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.73
LSS-201ENST00000356396 PRR25Q96S07 402 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 OSTCQ9NRP0 149 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 TMEM14CQ9P0S9 112 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 M0R2Z0 102 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 TDRG1Q3Y452 100 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 FMC1Q96HJ9 113 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 PRDM13Q9H4Q3 707 aa10.52□□□□□ -0.73
LSS-201ENST00000356396 CYSRT1A8MQ03 144 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 S100A9P06702 114 aaKnown RBP10.51□□□□□ -0.73
LSS-201ENST00000356396 GATA1P15976 413 aaPredicted RBP10.51□□□□□ -0.73
LSS-201ENST00000356396 CRISP2P16562 243 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 LYZL1Q6UWQ5 148 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 KLHL30-AS1Q8NEE0 82 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 PRSS22Q9GZN4 317 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 GAR1Q9NY12 217 aaKnown RBP10.51□□□□□ -0.73
LSS-201ENST00000356396 ZNF253O75346 499 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 CD28P10747 220 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 PSMG4Q5JS54 123 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 KLF12Q9Y4X4 402 aa10.51□□□□□ -0.73
LSS-201ENST00000356396 CDX1P47902 265 aaPredicted RBP10.5□□□□□ -0.73
LSS-201ENST00000356396 SMIM27A0A1W2PRY6 76 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 GATA3P23771 443 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 CFHR3Q02985 330 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 FAM106AQ4KMX7 169 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 DPF1Q92782 380 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 TP73-AS1Q9UF72 201 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 C19orf71A6NCJ1 209 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 S100A8P05109 93 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 NSUN5P1Q3KNT7 163 aa10.5□□□□□ -0.73
LSS-201ENST00000356396 SPATA3Q8NHX4 192 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms