RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CST9LQ9H4G1 147 aa19.01■□□□□ 0.63
CPNE1-202ENST00000352393 MINOS1-NBL1R4GNA1 71 aa19.01■□□□□ 0.63
CPNE1-202ENST00000352393 NDUFS7O75251 213 aa19■□□□□ 0.63
CPNE1-202ENST00000352393 OR9G4Q8NGQ1 327 aa19■□□□□ 0.63
CPNE1-202ENST00000352393 MSRB1Q9NZV6 116 aa19■□□□□ 0.63
CPNE1-202ENST00000352393 S100A7P31151 101 aa19■□□□□ 0.63
CPNE1-202ENST00000352393 CDSNQ15517 529 aa19■□□□□ 0.63
CPNE1-202ENST00000352393 PPBPP02775 128 aa18.99■□□□□ 0.63
CPNE1-202ENST00000352393 LRBAP50851 2863 aa18.99■□□□□ 0.63
CPNE1-202ENST00000352393 IGHV3OR16-8A0A075B7F1 116 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 ORM1P02763 201 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 LINC01559Q495D7 138 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 PRSS57Q6UWY2 283 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 Q8N9W7 124 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 MAP1LC3AQ9H492 121 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 ZFAND3Q9H8U3 227 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 FABP5P3A8MUU1 101 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 SIVA1O15304 175 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 HSD52Q0P140 79 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 ZNF502Q8TBZ5 544 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 MSRB2Q9Y3D2 182 aa18.98■□□□□ 0.63
CPNE1-202ENST00000352393 CCL21O00585 134 aa18.97■□□□□ 0.63
CPNE1-202ENST00000352393 FAM110DQ8TAY7 271 aaPredicted RBP18.97■□□□□ 0.63
CPNE1-202ENST00000352393 A1L4Q6 167 aa18.97■□□□□ 0.63
CPNE1-202ENST00000352393 PRAC2D3DTV9 90 aa18.97■□□□□ 0.63
CPNE1-202ENST00000352393 ERCC8Q13216 396 aa18.97■□□□□ 0.63
CPNE1-202ENST00000352393 IGHV3-35A0A0C4DH35 117 aa18.96■□□□□ 0.63
CPNE1-202ENST00000352393 UQCRFS1P47985 274 aa18.96■□□□□ 0.63
CPNE1-202ENST00000352393 KLK9Q2XQG4 91 aa18.96■□□□□ 0.63
CPNE1-202ENST00000352393 OCIAD2Q56VL3 154 aa18.96■□□□□ 0.63
CPNE1-202ENST00000352393 ADAMTSL5Q6ZMM2 481 aa18.96■□□□□ 0.63
CPNE1-202ENST00000352393 KLK9Q9UKQ9 250 aa18.96■□□□□ 0.63
CPNE1-202ENST00000352393 RBAKDNA6NC62 111 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 A6NDN8 102 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 GAS8-AS1O95177 125 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 DKK2Q9UBU2 259 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 H3BRM9 83 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 BUB3O43684 328 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 TCTAP57738 103 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 C15orf32Q32M92 178 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 OR4X2Q8NGF9 303 aa18.95■□□□□ 0.62
CPNE1-202ENST00000352393 PTPRQQ9UMZ3 2332 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 ZFP36P26651 326 aaKnown RBP18.94■□□□□ 0.62
CPNE1-202ENST00000352393 RAB9AP51151 201 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 ADORA2A-AS1P86434 159 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 SIRPDQ9H106 197 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 SPTBN2O15020 2390 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 RNF151Q2KHN1 245 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 WFDC3Q8IUB2 231 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 PIFOQ8TCI5 191 aa18.94■□□□□ 0.62
CPNE1-202ENST00000352393 PTPRZ1P23471 2315 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-202ENST00000352393 C9orf118A6NHY6 69 aa18.93■□□□□ 0.62
CPNE1-202ENST00000352393 TNFRSF6BO95407 300 aa18.93■□□□□ 0.62
CPNE1-202ENST00000352393 IL17RELQ6ZVW7 336 aa18.93■□□□□ 0.62
CPNE1-202ENST00000352393 PCP2Q8IVA1 136 aa18.93■□□□□ 0.62
CPNE1-202ENST00000352393 NXT2Q9NPJ8 142 aaKnown RBP18.93■□□□□ 0.62
CPNE1-202ENST00000352393 HRNRQ86YZ3 2850 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-202ENST00000352393 FCER1GP30273 86 aa18.92■□□□□ 0.62
CPNE1-202ENST00000352393 UFSP1Q6NVU6 142 aa18.92■□□□□ 0.62
CPNE1-202ENST00000352393 RNF182Q8N6D2 247 aa18.92■□□□□ 0.62
CPNE1-202ENST00000352393 JMJD8Q96S16 334 aa18.92■□□□□ 0.62
CPNE1-202ENST00000352393 SLC50A1Q9BRV3 221 aa18.92■□□□□ 0.62
CPNE1-202ENST00000352393 GAGE12BA1L429 117 aa18.92■□□□□ 0.62
CPNE1-202ENST00000352393 C18orf15Q96N68 181 aa18.92■□□□□ 0.62
CPNE1-202ENST00000352393 CLPSL1A2RUU4 121 aa18.91■□□□□ 0.62
CPNE1-202ENST00000352393 LEPP41159 167 aa18.91■□□□□ 0.62
CPNE1-202ENST00000352393 NMUP48645 174 aa18.91■□□□□ 0.62
CPNE1-202ENST00000352393 ZMAT4Q9H898 229 aa18.91■□□□□ 0.62
CPNE1-202ENST00000352393 KIR3DS1Q14943 382 aa18.91■□□□□ 0.62
CPNE1-202ENST00000352393 ODF1Q14990 250 aa18.91■□□□□ 0.62
CPNE1-202ENST00000352393 ECSCRQ19T08 205 aa18.91■□□□□ 0.62
CPNE1-202ENST00000352393 AJUBAQ96IF1 538 aa18.9■□□□□ 0.62
CPNE1-202ENST00000352393 ATP6V0E1O15342 81 aa18.89■□□□□ 0.62
CPNE1-202ENST00000352393 CLEC3BP05452 202 aa18.89■□□□□ 0.62
CPNE1-202ENST00000352393 EVI2AP22794 236 aa18.89■□□□□ 0.62
CPNE1-202ENST00000352393 CCDC140Q96MF4 163 aa18.89■□□□□ 0.62
CPNE1-202ENST00000352393 IGKV3D-20A0A0C4DH25 116 aa18.89■□□□□ 0.61
CPNE1-202ENST00000352393 GAGE10A6NGK3 116 aa18.89■□□□□ 0.61
CPNE1-202ENST00000352393 PPIFP30405 207 aaKnown RBP18.89■□□□□ 0.61
CPNE1-202ENST00000352393 C11orf21Q9P2W6 132 aa18.89■□□□□ 0.61
CPNE1-202ENST00000352393 DTX2Q86UW9 622 aa18.88■□□□□ 0.61
CPNE1-202ENST00000352393 GOSR1O95249 250 aa18.88■□□□□ 0.61
CPNE1-202ENST00000352393 GATA1P15976 413 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-202ENST00000352393 PSMG4Q5JS54 123 aa18.88■□□□□ 0.61
CPNE1-202ENST00000352393 AGPAT4-IT1Q9H0P7 198 aa18.88■□□□□ 0.61
CPNE1-202ENST00000352393 CEP295Q9C0D2 2601 aa18.88■□□□□ 0.61
CPNE1-202ENST00000352393 AP1S3Q96PC3 154 aa18.87■□□□□ 0.61
CPNE1-202ENST00000352393 IGLV2-18A0A075B6J9 118 aa18.86■□□□□ 0.61
CPNE1-202ENST00000352393 TRAV8-2A0A0B4J237 113 aa18.86■□□□□ 0.61
CPNE1-202ENST00000352393 IGHV3-66A0A0C4DH42 116 aa18.86■□□□□ 0.61
CPNE1-202ENST00000352393 GTF2H5Q6ZYL4 71 aa18.86■□□□□ 0.61
CPNE1-202ENST00000352393 Q8N8P6 123 aa18.86■□□□□ 0.61
CPNE1-202ENST00000352393 HHLA3Q9XRX5 114 aa18.86■□□□□ 0.61
CPNE1-202ENST00000352393 H3BUT2 72 aa18.86■□□□□ 0.61
CPNE1-202ENST00000352393 K7EP34 96 aa18.85■□□□□ 0.61
CPNE1-202ENST00000352393 MRPL53Q96EL3 112 aaKnown RBP18.85■□□□□ 0.61
CPNE1-202ENST00000352393 CSMD1Q96PZ7 3565 aa18.85■□□□□ 0.61
CPNE1-202ENST00000352393 IGKV2D-26A0A0A0MRZ7 120 aa18.85■□□□□ 0.61
CPNE1-202ENST00000352393 A0A0G2JLM5 398 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms