RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 BOD1L1Q8NFC6 3051 aa12.76□□□□□ -0.37
MBD1-204ENST00000347968 MED13Q9UHV7 2174 aa12.76□□□□□ -0.37
MBD1-204ENST00000347968 ZNF883P0CG24 379 aa12.76□□□□□ -0.37
MBD1-204ENST00000347968 TTC32Q5I0X7 151 aa12.76□□□□□ -0.37
MBD1-204ENST00000347968 TEN1Q86WV5 123 aa12.76□□□□□ -0.37
MBD1-204ENST00000347968 TRAV8-2A0A0B4J237 113 aa12.76□□□□□ -0.37
MBD1-204ENST00000347968 TCL1BO95988 128 aa12.75□□□□□ -0.37
MBD1-204ENST00000347968 ZMAT4Q9H898 229 aa12.75□□□□□ -0.37
MBD1-204ENST00000347968 WNK2Q9Y3S1 2297 aa12.75□□□□□ -0.37
MBD1-204ENST00000347968 ATP1A1-AS1Q5TC04 95 aa12.75□□□□□ -0.37
MBD1-204ENST00000347968 IGHV3-72A0A0B4J1Y9 119 aa12.75□□□□□ -0.37
MBD1-204ENST00000347968 C8orf46Q8TAG6 207 aa12.75□□□□□ -0.37
MBD1-204ENST00000347968 U3KQK5 164 aa12.75□□□□□ -0.37
MBD1-204ENST00000347968 ZZEF1O43149 2961 aa12.74□□□□□ -0.37
MBD1-204ENST00000347968 M0QXV9 152 aa12.74□□□□□ -0.37
MBD1-204ENST00000347968 MAP1LC3AQ9H492 121 aa12.74□□□□□ -0.37
MBD1-204ENST00000347968 Q8TAT8 98 aa12.74□□□□□ -0.37
MBD1-204ENST00000347968 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
MBD1-204ENST00000347968 ZNF493Q6ZR52 646 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 ATP6V0E2Q8NHE4 81 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 RITA1Q96K30 269 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 YAE1D1Q9NRH1 226 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 A0A087WX48 190 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
MBD1-204ENST00000347968 SNCGO76070 127 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 SRSF9Q13242 221 aaKnown RBP eCLIP12.73□□□□□ -0.37
MBD1-204ENST00000347968 TMEM133Q9H2Q1 129 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 ZCCHC24Q8N2G6 241 aaKnown RBP12.73□□□□□ -0.37
MBD1-204ENST00000347968 S4R3C0 116 aa12.73□□□□□ -0.37
MBD1-204ENST00000347968 SPTBN2O15020 2390 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 TRAV26-2A0A0B4J265 109 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 A0A1W2PPI3 338 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 SH2D1AO60880 128 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 MEIG1Q5JSS6 88 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 IGFL4Q6B9Z1 124 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 DEFB104AQ8WTQ1 72 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 H7C2G1 150 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 RHODO00212 210 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 CRIP2P52943 208 aaPredicted RBP12.72□□□□□ -0.37
MBD1-204ENST00000347968 PRB3Q04118 309 aaPredicted RBP12.72□□□□□ -0.37
MBD1-204ENST00000347968 POU2AF1Q16633 256 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 DEFB124Q8NES8 71 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 HIGD1AQ9Y241 93 aa12.72□□□□□ -0.37
MBD1-204ENST00000347968 A8MWV9 139 aa12.71□□□□□ -0.37
MBD1-204ENST00000347968 TNFRSF6BO95407 300 aa12.71□□□□□ -0.37
MBD1-204ENST00000347968 SCGB1C2P0DMR2 95 aa12.71□□□□□ -0.37
MBD1-204ENST00000347968 SRSF1Q07955 248 aaKnown RBP eCLIP12.71□□□□□ -0.37
MBD1-204ENST00000347968 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.37
MBD1-204ENST00000347968 DEFB127Q9H1M4 99 aa12.71□□□□□ -0.37
MBD1-204ENST00000347968 THAP8Q8NA92 274 aa12.71□□□□□ -0.38
MBD1-204ENST00000347968 VKORC1Q9BQB6 163 aa12.71□□□□□ -0.38
MBD1-204ENST00000347968 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
MBD1-204ENST00000347968 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
MBD1-204ENST00000347968 IFITM1P13164 125 aa12.7□□□□□ -0.38
MBD1-204ENST00000347968 VPREB3Q9UKI3 123 aa12.7□□□□□ -0.38
MBD1-204ENST00000347968 PKDREJQ9NTG1 2253 aa12.7□□□□□ -0.38
MBD1-204ENST00000347968 KLHL30-AS1Q8NEE0 82 aa12.7□□□□□ -0.38
MBD1-204ENST00000347968 SLC25A39Q9BZJ4 359 aaPredicted RBP12.7□□□□□ -0.38
MBD1-204ENST00000347968 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
MBD1-204ENST00000347968 PIFOQ8TCI5 191 aa12.7□□□□□ -0.38
MBD1-204ENST00000347968 POLEQ07864 2286 aa12.69□□□□□ -0.38
MBD1-204ENST00000347968 LGALS1P09382 135 aaKnown RBP12.69□□□□□ -0.38
MBD1-204ENST00000347968 EGR2P11161 476 aaPredicted RBP12.69□□□□□ -0.38
MBD1-204ENST00000347968 IGHV1-2P23083 117 aa12.69□□□□□ -0.38
MBD1-204ENST00000347968 GATD1Q8NB37 220 aa12.69□□□□□ -0.38
MBD1-204ENST00000347968 ZNF71Q9NQZ8 489 aaPredicted RBP12.69□□□□□ -0.38
MBD1-204ENST00000347968 MYMXA0A1B0GTQ4 84 aa12.69□□□□□ -0.38
MBD1-204ENST00000347968 TRPT1Q86TN4 253 aaKnown RBP12.69□□□□□ -0.38
MBD1-204ENST00000347968 RNF185Q96GF1 192 aa12.69□□□□□ -0.38
MBD1-204ENST00000347968 CCL13Q99616 98 aa12.69□□□□□ -0.38
MBD1-204ENST00000347968 SPRY3O43610 288 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 PPP1R27Q86WC6 154 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 ENSAO43768 121 aaKnown RBP12.68□□□□□ -0.38
MBD1-204ENST00000347968 TTTY12Q9BZ98 90 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 AAMDCQ9H7C9 122 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 RAXQ9Y2V3 346 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 C9JAW5 83 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 SRD5A1P18405 259 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 ZNF80P51504 273 aaPredicted RBP12.68□□□□□ -0.38
MBD1-204ENST00000347968 SUB1P53999 127 aaKnown RBP eCLIP12.68□□□□□ -0.38
MBD1-204ENST00000347968 TAL2Q16559 108 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 TMEM78Q5T7P6 136 aa12.68□□□□□ -0.38
MBD1-204ENST00000347968 ORM1P02763 201 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 EMP1P54849 157 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 RAB9BQ9NP90 201 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 ZNF292O60281 2723 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 CACNA1BQ00975 2339 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 CGB3P0DN86 165 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 CGB7P0DN87 165 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 RAX2Q96IS3 184 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 ONECUT1Q9UBC0 465 aa12.67□□□□□ -0.38
MBD1-204ENST00000347968 ZNF815PA8K554 130 aa12.66□□□□□ -0.38
MBD1-204ENST00000347968 SRRM5B3KS81 715 aa12.66□□□□□ -0.38
MBD1-204ENST00000347968 CCL3L1P16619 93 aa12.66□□□□□ -0.38
MBD1-204ENST00000347968 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
MBD1-204ENST00000347968 PTPRZ1P23471 2315 aaPredicted RBP12.66□□□□□ -0.38
MBD1-204ENST00000347968 ATP5LO75964 103 aa12.66□□□□□ -0.38
MBD1-204ENST00000347968 CNEP1R1Q8N9A8 125 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms