RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ZNF492Q9P255 531 aa10.27□□□□□ -0.77
CDC42-202ENST00000344548 SORL1Q92673 2214 aa10.27□□□□□ -0.77
CDC42-202ENST00000344548 RNASE1P07998 156 aaKnown RBP10.26□□□□□ -0.77
CDC42-202ENST00000344548 KHDC1LQ5JSQ8 128 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 Q6ZQT7 251 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 ZNF575Q86XF7 245 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 LINC01006Q8NI28 216 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 BTF3L4Q96K17 158 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 RPP21Q9H633 154 aaKnown RBP10.26□□□□□ -0.77
CDC42-202ENST00000344548 A0A1W2PS18 150 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 HIGD1CA8MV81 97 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 INAFM1C9JVW0 142 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 F6UB75 175 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 P01737 135 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 CDX1P47902 265 aaPredicted RBP10.26□□□□□ -0.77
CDC42-202ENST00000344548 NDUFA6P56556 154 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 TSKUQ8WUA8 353 aa10.26□□□□□ -0.77
CDC42-202ENST00000344548 HILS1P60008 231 aa10.25□□□□□ -0.77
CDC42-202ENST00000344548 GDF5OSQ5U4N7 250 aa10.25□□□□□ -0.77
CDC42-202ENST00000344548 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
CDC42-202ENST00000344548 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
CDC42-202ENST00000344548 BIN3Q9NQY0 253 aa10.25□□□□□ -0.77
CDC42-202ENST00000344548 TMEM160Q9NX00 188 aa10.25□□□□□ -0.77
CDC42-202ENST00000344548 NIPBLQ6KC79 2804 aaeCLIP10.25□□□□□ -0.77
CDC42-202ENST00000344548 WNK1Q9H4A3 2382 aa10.25□□□□□ -0.77
CDC42-202ENST00000344548 CD28P10747 220 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 KLF5Q13887 457 aaPredicted RBP10.24□□□□□ -0.77
CDC42-202ENST00000344548 WFDC3Q8IUB2 231 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 ARL6IP6Q8N6S5 226 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 UFC1Q9Y3C8 167 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 TRAPPC1Q9Y5R8 145 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 SERTM2A0A1B0GWG4 89 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 S100A6P06703 90 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 OR2D3Q8NGH3 330 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 DCANP1Q8TF63 244 aa10.24□□□□□ -0.77
CDC42-202ENST00000344548 DAZAP1Q96EP5 407 aaKnown RBP10.24□□□□□ -0.77
CDC42-202ENST00000344548 A0A1B0GUS0 222 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 IZUMO1RA6ND01 250 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 A8MWP6 167 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 HAX1O00165 279 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 SH2D1AO60880 128 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 KLHL30-AS1Q8NEE0 82 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 A0A1W2PRX2 142 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 C2orf70A6NJV1 201 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 TFPI2P48307 235 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 TMEM136Q6ZRR5 245 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 COX8CQ7Z4L0 72 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 REC114Q7Z4M0 266 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 ZNF738Q8NE65 137 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 C4orf3Q8WVX3 66 aa10.23□□□□□ -0.77
CDC42-202ENST00000344548 TRAV9-1A0A075B6T8 112 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 TMSB15BA0A087X1C1 80 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 SNURFLB1AK76 121 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 LGALS9O00182 355 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 DLX4Q92988 240 aaPredicted RBP10.22□□□□□ -0.77
CDC42-202ENST00000344548 PGLYRP4Q96LB8 373 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 RBAKDNA6NC62 111 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 UBE2CO00762 179 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 MEOX2P50222 304 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 ZNF418Q8TF45 676 aaPredicted RBP10.22□□□□□ -0.77
CDC42-202ENST00000344548 CITED2Q99967 270 aaPredicted RBP10.22□□□□□ -0.77
CDC42-202ENST00000344548 MRPL18Q9H0U6 180 aaKnown RBP10.22□□□□□ -0.77
CDC42-202ENST00000344548 NAT8BQ9UHF3 227 aa10.22□□□□□ -0.77
CDC42-202ENST00000344548 KIAA1644Q3SXP7 199 aa10.21□□□□□ -0.77
CDC42-202ENST00000344548 PDZD11Q5EBL8 140 aa10.21□□□□□ -0.77
CDC42-202ENST00000344548 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.77
CDC42-202ENST00000344548 PRR9Q5T870 116 aa10.21□□□□□ -0.77
CDC42-202ENST00000344548 OR1N2Q8NGR9 330 aa10.21□□□□□ -0.77
CDC42-202ENST00000344548 MRPL53Q96EL3 112 aaKnown RBP10.21□□□□□ -0.77
CDC42-202ENST00000344548 MS4A6AQ9H2W1 248 aa10.21□□□□□ -0.77
CDC42-202ENST00000344548 A8MWL6 223 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 LINC01619G3V211 115 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 KIR3DS1Q14943 382 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 SMUG1Q53HV7 270 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 CT83Q5H943 113 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 C9orf47Q6ZRZ4 202 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 C11orf21Q9P2W6 132 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 C2CD3Q4AC94 2353 aa10.21□□□□□ -0.78
CDC42-202ENST00000344548 AGRNO00468 2067 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 GRIFINA4D1Z8 144 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 CT45A10P0DMU9 189 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 HOXA5P20719 270 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 CAMPP49913 170 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 ZNF138P52744 262 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 RAX2Q96IS3 184 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
CDC42-202ENST00000344548 C16orf95Q9H693 158 aa10.2□□□□□ -0.78
CDC42-202ENST00000344548 A0A1B0GXF2 115 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 J3KRW8 73 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 RAB4BP61018 213 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 SLAQ13239 276 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 FAM162BQ5T6X4 162 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 MUC21A0A0G2JKD1 596 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 MUC21A0A140T8X8 626 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 AKR1D1P51857 326 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 SSTP61278 116 aa10.19□□□□□ -0.78
CDC42-202ENST00000344548 MUC21Q5SSG8 566 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms