RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 ATRXP46100 2492 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 SHISA3A0PJX4 238 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 BUB3O43684 328 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 TMEM178BH3BS89 294 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 K7ERS5 55 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 ROS1P08922 2347 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 H0YJW9 148 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 IGLV3-21P80748 117 aaPredicted RBP11.27□□□□□ -0.61
PDE4D-203ENST00000340635 Q9HAA7 133 aa11.27□□□□□ -0.61
PDE4D-203ENST00000340635 MRPL14Q6P1L8 145 aaKnown RBP11.26□□□□□ -0.61
PDE4D-203ENST00000340635 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 ZNF883P0CG24 379 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 K7EP13 123 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 GVINP1Q7Z2Y8 2422 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 PDE6HQ13956 83 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 H0YIZ8 118 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 XCL1P47992 114 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 BTCP35070 178 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 FREM1Q5H8C1 2179 aa11.26□□□□□ -0.61
PDE4D-203ENST00000340635 FNDC1Q4ZHG4 1894 aaPredicted RBP11.25□□□□□ -0.61
PDE4D-203ENST00000340635 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
PDE4D-203ENST00000340635 Q86TA4 180 aa11.25□□□□□ -0.61
PDE4D-203ENST00000340635 SPRR3Q9UBC9 169 aa11.25□□□□□ -0.61
PDE4D-203ENST00000340635 IGHV1-24A0A0C4DH33 117 aa11.25□□□□□ -0.61
PDE4D-203ENST00000340635 CEND1Q8N111 149 aa11.25□□□□□ -0.61
PDE4D-203ENST00000340635 NLRC5Q86WI3 1866 aa11.25□□□□□ -0.61
PDE4D-203ENST00000340635 MST1LQ2TV78 715 aa11.25□□□□□ -0.61
PDE4D-203ENST00000340635 Q8N8P6 123 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 C20orf144Q9BQM9 153 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 SIGLEC9Q9Y336 463 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 COL11A2P13942 1736 aaPredicted RBP11.24□□□□□ -0.61
PDE4D-203ENST00000340635 SAA4P35542 130 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 IGFBPL1Q8WX77 278 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 ETDBQ3ZM63 59 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
PDE4D-203ENST00000340635 LYZL4Q96KX0 146 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 COL24A1Q17RW2 1714 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
PDE4D-203ENST00000340635 MED13LQ71F56 2210 aa11.23□□□□□ -0.61
PDE4D-203ENST00000340635 K7EP34 96 aa11.23□□□□□ -0.61
PDE4D-203ENST00000340635 SPATA25Q9BR10 227 aa11.23□□□□□ -0.61
PDE4D-203ENST00000340635 BAALC-AS2P0C853 105 aa11.23□□□□□ -0.61
PDE4D-203ENST00000340635 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
PDE4D-203ENST00000340635 PKDREJQ9NTG1 2253 aa11.23□□□□□ -0.61
PDE4D-203ENST00000340635 VSIG2Q96IQ7 327 aa11.23□□□□□ -0.61
PDE4D-203ENST00000340635 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 C9orf47Q6ZRZ4 202 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 TRAV3A0A0B4J244 114 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 GNLYP22749 145 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 UBE2AP49459 152 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 PRSS46E5RG02 174 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 MED12LQ86YW9 2145 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 Q0VG73 95 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 CASC2Q6XLA1 102 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 EFNA2O43921 213 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 ACYP1P07311 99 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 CDKN1BP46527 198 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 SPTSSBQ8NFR3 76 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 TRAV26-2A0A0B4J265 109 aa11.22□□□□□ -0.61
PDE4D-203ENST00000340635 RPP25LQ8N5L8 163 aaKnown RBP11.22□□□□□ -0.61
PDE4D-203ENST00000340635 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
PDE4D-203ENST00000340635 TMEM213A2RRL7 107 aa11.21□□□□□ -0.61
PDE4D-203ENST00000340635 LRP5O75197 1615 aa11.21□□□□□ -0.62
PDE4D-203ENST00000340635 SRRM5B3KS81 715 aa11.21□□□□□ -0.62
PDE4D-203ENST00000340635 SS18L2Q9UHA2 77 aa11.21□□□□□ -0.62
PDE4D-203ENST00000340635 A0A1W2PPM0 123 aa11.21□□□□□ -0.62
PDE4D-203ENST00000340635 SIPA1L1O43166 1804 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 SHANK2-AS3Q9BTD1 123 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 POLR3KQ9Y2Y1 108 aaPredicted RBP11.2□□□□□ -0.62
PDE4D-203ENST00000340635 CFPP27918 469 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 NREPQ16612 68 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
PDE4D-203ENST00000340635 PSMB8P28062 276 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 BRK1Q8WUW1 75 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 GATA3P23771 443 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 FOXF2Q12947 444 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 RNF223E7ERA6 249 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 GLI3P10071 1580 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 IGKV4-1P06312 121 aa11.2□□□□□ -0.62
PDE4D-203ENST00000340635 IGLL5B9A064 214 aa11.19□□□□□ -0.62
PDE4D-203ENST00000340635 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
PDE4D-203ENST00000340635 NTF4P34130 210 aa11.19□□□□□ -0.62
PDE4D-203ENST00000340635 PLXNB3Q9ULL4 1909 aa11.19□□□□□ -0.62
PDE4D-203ENST00000340635 H3BMG7 143 aa11.19□□□□□ -0.62
PDE4D-203ENST00000340635 SRSF2Q01130 221 aaKnown RBP11.19□□□□□ -0.62
PDE4D-203ENST00000340635 Q6ZQT7 251 aa11.19□□□□□ -0.62
PDE4D-203ENST00000340635 NDUFB8O95169 186 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms