RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 C2CD3Q4AC94 2353 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 TMEM189A5PLL7 270 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 SRRM4A7MD48 611 aaKnown RBP8.17□□□□□ -1.1
ABCF1-201ENST00000326195 FXYD7P58549 80 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 RPEQ96AT9 228 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 TRAV40A0A0B4J280 105 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 MOSP00540 346 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 LIPFP07098 398 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 SAMD5Q5TGI4 173 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 C1orf229Q6ZS94 237 aaPredicted RBP8.17□□□□□ -1.1
ABCF1-201ENST00000326195 CACNG8Q8WXS5 425 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 SPAG8Q99932 426 aaPredicted RBP8.17□□□□□ -1.1
ABCF1-201ENST00000326195 YAE1D1Q9NRH1 226 aa8.17□□□□□ -1.1
ABCF1-201ENST00000326195 RBP4P02753 201 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 RPL27AP46776 148 aaKnown RBP8.16□□□□□ -1.1
ABCF1-201ENST00000326195 LMO4P61968 165 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 HBBP68871 147 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 LOXL1Q08397 574 aaPredicted RBP8.16□□□□□ -1.1
ABCF1-201ENST00000326195 C2orf83Q53S99 150 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 DDB2Q92466 427 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 H3BTX0 84 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 CFAP161Q6P656 301 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 ZNF48Q96MX3 618 aaPredicted RBP8.16□□□□□ -1.1
ABCF1-201ENST00000326195 MRPL32Q9BYC8 188 aaKnown RBP8.16□□□□□ -1.1
ABCF1-201ENST00000326195 PGPA6NDG6 321 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 K7EQM0 130 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 RNASE2P10153 161 aaKnown RBP8.16□□□□□ -1.1
ABCF1-201ENST00000326195 LYZP61626 148 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 LY6EQ16553 131 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 BOD1L2Q8IYS8 172 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 FAM167A-AS1Q96KT0 104 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 TTTY13Q9BZ97 58 aa8.16□□□□□ -1.1
ABCF1-201ENST00000326195 SPANXB1Q9NS25 103 aaPredicted RBP8.16□□□□□ -1.1
ABCF1-201ENST00000326195 OR5AL1P0C617 328 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 PRB4P10163 310 aaPredicted RBP8.15□□□□□ -1.1
ABCF1-201ENST00000326195 FABP2P12104 132 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 TEX36Q5VZQ5 186 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 LINC00305Q7Z4B0 112 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 GEMIN7Q9H840 131 aaKnown RBP8.15□□□□□ -1.1
ABCF1-201ENST00000326195 ARPC1AQ92747 370 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 SLC25A33Q9BSK2 321 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 TPPP3Q9BW30 176 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 SLC25A2Q9BXI2 301 aa8.15□□□□□ -1.1
ABCF1-201ENST00000326195 FXYD2P54710 66 aa8.15□□□□□ -1.11
ABCF1-201ENST00000326195 ETDBQ3ZM63 59 aa8.15□□□□□ -1.11
ABCF1-201ENST00000326195 AVPP01185 164 aa8.14□□□□□ -1.11
ABCF1-201ENST00000326195 VMO1Q7Z5L0 202 aa8.14□□□□□ -1.11
ABCF1-201ENST00000326195 OR8A1Q8NGG7 326 aa8.14□□□□□ -1.11
ABCF1-201ENST00000326195 SPATA25Q9BR10 227 aa8.14□□□□□ -1.11
ABCF1-201ENST00000326195 ZNF329Q86UD4 541 aa8.14□□□□□ -1.11
ABCF1-201ENST00000326195 HSPB8Q9UJY1 196 aa8.14□□□□□ -1.11
ABCF1-201ENST00000326195 A0A096LNJ9 63 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 A8MWL6 223 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 APOHP02749 345 aaPredicted RBP8.13□□□□□ -1.11
ABCF1-201ENST00000326195 IGHV4-38-2P0DP08 117 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 SSBP2P81877 361 aaPredicted RBP8.13□□□□□ -1.11
ABCF1-201ENST00000326195 POU2AF1Q16633 256 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 PEX7O00628 323 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 CHEK1O14757 476 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 CGB3P0DN86 165 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 CGB7P0DN87 165 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 ATP5L2Q7Z4Y8 100 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 VGLL1Q99990 258 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 AMTNQ6UX39 209 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 FOXI2Q6ZQN5 318 aa8.13□□□□□ -1.11
ABCF1-201ENST00000326195 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 TCRBV4S1A1TA0A5B7 111 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 LTAP01374 205 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 MSMBP08118 114 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 NMUP48645 174 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 HIST2H2BDQ6DRA6 164 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 TMEM219Q86XT9 240 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 NDFIP1Q9BT67 221 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 COL6A5A8TX70 2615 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 H3BMG7 143 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 P01737 135 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 BCL6BQ8N143 479 aaPredicted RBP8.12□□□□□ -1.11
ABCF1-201ENST00000326195 TMEM167AQ8TBQ9 72 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 RASL11BQ9BPW5 248 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 C20orf78Q9BR46 151 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 SS18L2Q9UHA2 77 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 IGHV1-8P0DP01 117 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 GCSHP23434 173 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 NDUFA4L2Q9NRX3 87 aa8.12□□□□□ -1.11
ABCF1-201ENST00000326195 TMEM177Q53S58 311 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 ZNF833PQ6ZTB9 187 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 PHLDA1Q8WV24 401 aaPredicted RBP8.11□□□□□ -1.11
ABCF1-201ENST00000326195 ASCL2Q99929 193 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 NCBP2LA6PVI3 153 aaKnown RBP8.11□□□□□ -1.11
ABCF1-201ENST00000326195 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
ABCF1-201ENST00000326195 CACNG7P62955 275 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 WT1-ASQ06250 92 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 TCTEX1D4Q5JR98 221 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 FAM162BQ5T6X4 162 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 SHISA2Q6UWI4 295 aa8.11□□□□□ -1.11
ABCF1-201ENST00000326195 WFDC3Q8IUB2 231 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms