RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 LINC00614P0C842 121 aa10.72□□□□□ -0.69
DDX54-202ENST00000314045 OR10J3Q5JRS4 329 aa10.72□□□□□ -0.69
DDX54-202ENST00000314045 PAPPA-AS1Q5QFB9 102 aa10.72□□□□□ -0.69
DDX54-202ENST00000314045 BCL6BQ8N143 479 aaPredicted RBP10.72□□□□□ -0.69
DDX54-202ENST00000314045 MRPL27Q9P0M9 148 aaKnown RBP10.72□□□□□ -0.69
DDX54-202ENST00000314045 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
DDX54-202ENST00000314045 DYNAPQ8N1N2 210 aa10.72□□□□□ -0.69
DDX54-202ENST00000314045 EIF4EBP1Q13541 118 aaPredicted RBP10.71□□□□□ -0.69
DDX54-202ENST00000314045 C3orf56Q8N813 242 aa10.71□□□□□ -0.69
DDX54-202ENST00000314045 PRR25Q96S07 402 aa10.71□□□□□ -0.69
DDX54-202ENST00000314045 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.69
DDX54-202ENST00000314045 UBE2E2Q96LR5 201 aa10.71□□□□□ -0.69
DDX54-202ENST00000314045 FN1P02751 2386 aaKnown RBP10.71□□□□□ -0.7
DDX54-202ENST00000314045 C7orf71A4D174 169 aa10.71□□□□□ -0.7
DDX54-202ENST00000314045 ATP5LO75964 103 aa10.71□□□□□ -0.7
DDX54-202ENST00000314045 EVI2AP22794 236 aa10.71□□□□□ -0.7
DDX54-202ENST00000314045 MORN5Q5VZ52 161 aa10.71□□□□□ -0.7
DDX54-202ENST00000314045 RASL11AQ6T310 242 aa10.71□□□□□ -0.7
DDX54-202ENST00000314045 SCGB3A1Q96QR1 104 aa10.71□□□□□ -0.7
DDX54-202ENST00000314045 HTN3P15516 51 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 SMPXQ9UHP9 88 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 NCR2O95944 276 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 C10orf91Q5T1B1 145 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 ST20Q9HBF5 79 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 LURAP1LQ8IV03 231 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 C8orf49Q96NF6 230 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 NXT2Q9NPJ8 142 aaKnown RBP10.7□□□□□ -0.7
DDX54-202ENST00000314045 TCF21O43680 179 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 ZNF324O75467 553 aaPredicted RBP10.7□□□□□ -0.7
DDX54-202ENST00000314045 GFI1BQ5VTD9 330 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
DDX54-202ENST00000314045 KMT2EQ8IZD2 1858 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 ARMS2P0C7Q2 107 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 C19orf54Q5BKX5 351 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 HIST2H2BCQ6DN03 193 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 NIT1Q86X76 327 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 IGHG2P01859 326 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 HLA-DMBP28068 263 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
DDX54-202ENST00000314045 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 IGKV3OR2-268A0A0C4DH90 116 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 TNFRSF13BO14836 293 aaPredicted RBP10.69□□□□□ -0.7
DDX54-202ENST00000314045 SPINK13Q1W4C9 94 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 DEFB136Q30KP8 78 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 CFHR4Q92496 578 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 RCHY1Q96PM5 261 aa10.69□□□□□ -0.7
DDX54-202ENST00000314045 D6R8Y8 96 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 LGALS1P09382 135 aaKnown RBP10.68□□□□□ -0.7
DDX54-202ENST00000314045 TMEM160Q9NX00 188 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 HCFC1P51610 2035 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 VGLL1Q99990 258 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 ZNF295-AS1Q8N0V1 137 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 LRRC75A-AS1Q8N1F1 130 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 PLP1P60201 277 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 FOXE3Q13461 319 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 WFDC11Q8NEX6 87 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 GEMIN7Q9H840 131 aaKnown RBP10.68□□□□□ -0.7
DDX54-202ENST00000314045 UQCR10Q9UDW1 63 aa10.68□□□□□ -0.7
DDX54-202ENST00000314045 C14orf178Q8N769 122 aaPredicted RBP10.67□□□□□ -0.7
DDX54-202ENST00000314045 HIST1H2BLQ99880 126 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 FOXC2Q99958 501 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 CPAMD8Q8IZJ3 1885 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 C5orf52A6NGY3 159 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 SCGB1C2P0DMR2 95 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 SLC25A34Q6PIV7 304 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 FAM231DQ6ZW35 169 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 TMEM256Q8N2U0 113 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 A6NDX4 124 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 AMN1Q8IY45 258 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 DMRT1Q9Y5R6 373 aa10.67□□□□□ -0.7
DDX54-202ENST00000314045 FAM231BA6NCW3 169 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 TMEM262E9PQX1 116 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.66□□□□□ -0.7
DDX54-202ENST00000314045 INSP01308 110 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 HBDP02042 147 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 CT83Q5H943 113 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 FAM167A-AS1Q96KT0 104 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 C1QTNF4Q9BXJ3 329 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 XCL2Q9UBD3 114 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 UBE2CO00762 179 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 GP9P14770 177 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 SRSF1Q07955 248 aaKnown RBP eCLIP10.66□□□□□ -0.7
DDX54-202ENST00000314045 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 GFRA4Q9GZZ7 299 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 V9GYV3 84 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 ZNF415Q09FC8 603 aa10.66□□□□□ -0.7
DDX54-202ENST00000314045 A0A1W2PPR1 153 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 LINC01548A6NM66 108 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 BPTFQ12830 3046 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 LY6LH3BQJ8 138 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 TMEM170BQ5T4T1 132 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 PMCHL2Q9BQD1 86 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 UNC80Q8N2C7 3258 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 TRGV1A0A0A0MS02 117 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 BUB3O43684 328 aa10.65□□□□□ -0.7
DDX54-202ENST00000314045 AMBPP02760 352 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms