RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GOLT1BQ9Y3E0 138 aa13.09□□□□□ -0.31
SSSCA1-201ENST00000309328 DNAH9Q9NYC9 4486 aa13.09□□□□□ -0.31
SSSCA1-201ENST00000309328 INSP01308 110 aa13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 ZNF705DP0CH99 300 aaPredicted RBP13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 ZNF705BP0CI00 300 aaPredicted RBP13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 ZNF138P52744 262 aa13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 CYB561D1Q8N8Q1 229 aa13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 SLC35B3Q9H1N7 401 aa13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 XCL2Q9UBD3 114 aa13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 EPDR1Q9UM22 224 aa13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 U3KQK5 164 aa13.08□□□□□ -0.32
SSSCA1-201ENST00000309328 TCRAP04437 139 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 UBE2G2P60604 165 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 CST9LP1Q5W188 147 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 TEX261Q6UWH6 196 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 TMEM256Q8N2U0 113 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 OVOL2Q9BRP0 275 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 AGPAT4-IT1Q9H0P7 198 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 ZNF492Q9P255 531 aa13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 YTHDF2Q9Y5A9 579 aaKnown RBP13.07□□□□□ -0.32
SSSCA1-201ENST00000309328 IGKV2-40A0A087WW87 121 aaPredicted RBP13.06□□□□□ -0.32
SSSCA1-201ENST00000309328 IGKV2D-40P01614 121 aaPredicted RBP13.06□□□□□ -0.32
SSSCA1-201ENST00000309328 CT45A10P0DMU9 189 aa13.06□□□□□ -0.32
SSSCA1-201ENST00000309328 CRISP2P16562 243 aa13.06□□□□□ -0.32
SSSCA1-201ENST00000309328 SPINK13Q1W4C9 94 aa13.06□□□□□ -0.32
SSSCA1-201ENST00000309328 GOLT1AQ6ZVE7 132 aa13.06□□□□□ -0.32
SSSCA1-201ENST00000309328 CSNK1G2-AS1Q8NCQ2 148 aa13.06□□□□□ -0.32
SSSCA1-201ENST00000309328 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 PAGE4O60829 102 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 CCDC28AQ8IWP9 274 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 TMEM75Q8N9X5 138 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 NEU1Q99519 415 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 RARRES2Q99969 163 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 VGLL1Q99990 258 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 NDFIP1Q9BT67 221 aa13.05□□□□□ -0.32
SSSCA1-201ENST00000309328 A0A1B0GV50 99 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 M0R2Z0 102 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 PEX7O00628 323 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 MIFP14174 115 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 ZNF705AQ6ZN79 300 aaPredicted RBP13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 OR11H2Q8NH07 326 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 FAM19A4Q96LR4 140 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 GNG13Q9P2W3 67 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 RPH3ALQ9UNE2 315 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 NBEAL2Q6ZNJ1 2754 aa13.04□□□□□ -0.32
SSSCA1-201ENST00000309328 KLLNB2CW77 178 aa13.03□□□□□ -0.32
SSSCA1-201ENST00000309328 C11orf94C9JXX5 98 aa13.03□□□□□ -0.32
SSSCA1-201ENST00000309328 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
SSSCA1-201ENST00000309328 ERCC8Q13216 396 aa13.03□□□□□ -0.32
SSSCA1-201ENST00000309328 ZNF680Q8NEM1 530 aa13.03□□□□□ -0.32
SSSCA1-201ENST00000309328 AGRNO00468 2067 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 H7BYZ3 331 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 CRXO43186 299 aaPredicted RBP13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 GPX1P07203 203 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 FXYD7P58549 80 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 GNG5P63218 68 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 FMC1Q96HJ9 113 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 NIPSNAP3BQ9BS92 247 aa13.02□□□□□ -0.33
SSSCA1-201ENST00000309328 PDE6DO43924 150 aa13.01□□□□□ -0.33
SSSCA1-201ENST00000309328 BCL2P10415 239 aa13.01□□□□□ -0.33
SSSCA1-201ENST00000309328 FLI1Q01543 452 aaPredicted RBP13.01□□□□□ -0.33
SSSCA1-201ENST00000309328 C11orf68Q9H3H3 251 aaKnown RBP13.01□□□□□ -0.33
SSSCA1-201ENST00000309328 RETNQ9HD89 108 aa13.01□□□□□ -0.33
SSSCA1-201ENST00000309328 COL7A1Q02388 2944 aa13.01□□□□□ -0.33
SSSCA1-201ENST00000309328 TRBV6-1A0A0K0K1D8 114 aa13□□□□□ -0.33
SSSCA1-201ENST00000309328 C7orf71A4D174 169 aa13□□□□□ -0.33
SSSCA1-201ENST00000309328 TMEM189A5PLL7 270 aa13□□□□□ -0.33
SSSCA1-201ENST00000309328 CCL20P78556 96 aa13□□□□□ -0.33
SSSCA1-201ENST00000309328 MEF2BQ02080 365 aaPredicted RBP13□□□□□ -0.33
SSSCA1-201ENST00000309328 GFI1BQ5VTD9 330 aa13□□□□□ -0.33
SSSCA1-201ENST00000309328 VAX2Q9UIW0 290 aa13□□□□□ -0.33
SSSCA1-201ENST00000309328 HUWE1Q7Z6Z7 4374 aaKnown RBP13□□□□□ -0.33
SSSCA1-201ENST00000309328 TRAV12-2A0A075B6T6 113 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 AKR1C3P42330 323 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 ATP5G3P48201 142 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 TAS2R60P59551 318 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 UBE2G1P62253 170 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 ZFAND2AQ8N6M9 145 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 Q8TAT8 98 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 PYGO2Q9BRQ0 406 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 TREM1Q9NP99 234 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 PSG8Q9UQ74 426 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 ZFP30Q9Y2G7 519 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 KLF12Q9Y4X4 402 aa12.99□□□□□ -0.33
SSSCA1-201ENST00000309328 TRAV8-1A0A0A6YYK1 113 aa12.98□□□□□ -0.33
SSSCA1-201ENST00000309328 RRN3P1Q2M238 152 aa12.98□□□□□ -0.33
SSSCA1-201ENST00000309328 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
SSSCA1-201ENST00000309328 C11orf52Q96A22 123 aa12.98□□□□□ -0.33
SSSCA1-201ENST00000309328 LINC01587Q99440 93 aa12.98□□□□□ -0.33
SSSCA1-201ENST00000309328 X6R8D5 127 aa12.98□□□□□ -0.33
SSSCA1-201ENST00000309328 TGP01266 2768 aa12.98□□□□□ -0.33
SSSCA1-201ENST00000309328 IGHV3OR16-12A0A075B7B8 117 aa12.97□□□□□ -0.33
SSSCA1-201ENST00000309328 IGLV2-11P01706 119 aa12.97□□□□□ -0.33
SSSCA1-201ENST00000309328 PRB4P10163 310 aaPredicted RBP12.97□□□□□ -0.33
SSSCA1-201ENST00000309328 RAB14P61106 215 aa12.97□□□□□ -0.33
SSSCA1-201ENST00000309328 TMEM183BQ1AE95 376 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms