RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 KLF2Q9Y5W3 355 aaPredicted RBP11.95□□□□□ -0.5
SCN3B-201ENST00000299333 MTCL1Q9Y4B5 1905 aaKnown RBP11.95□□□□□ -0.5
SCN3B-201ENST00000299333 NDUFS7O75251 213 aa11.95□□□□□ -0.5
SCN3B-201ENST00000299333 IGKV1D-17A0A075B6S4 117 aa11.94□□□□□ -0.5
SCN3B-201ENST00000299333 IGHV3-38A0A0C4DH36 116 aa11.94□□□□□ -0.5
SCN3B-201ENST00000299333 G3V4G9 280 aa11.94□□□□□ -0.5
SCN3B-201ENST00000299333 KLK9Q9UKQ9 250 aa11.94□□□□□ -0.5
SCN3B-201ENST00000299333 CMC4P56277 68 aaPredicted RBP11.94□□□□□ -0.5
SCN3B-201ENST00000299333 BRD3OSQ6XYD6 125 aa11.94□□□□□ -0.5
SCN3B-201ENST00000299333 TP53BP1Q12888 1972 aaPredicted RBP11.94□□□□□ -0.5
SCN3B-201ENST00000299333 FAM231DQ6ZW35 169 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 LRRK1Q38SD2 2015 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 CFHR3Q02985 330 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 GBF1Q92538 1859 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 CEP250Q9BV73 2442 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 OVOL3O00110 214 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 NDUFS5O43920 106 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 TRBV19A0A075B6N1 114 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 TRAV13-2A0A0B4J235 113 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 IGKV1-6A0A0C4DH72 117 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 H3BUX3 64 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 MINOS1Q5TGZ0 78 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 PCP2Q8IVA1 136 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 MINOS1-NBL1R4GNA1 71 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 CFC1BP0CG36 223 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 CFC1P0CG37 223 aa11.93□□□□□ -0.5
SCN3B-201ENST00000299333 TNS1Q9HBL0 1735 aaKnown RBP11.92□□□□□ -0.5
SCN3B-201ENST00000299333 NTN3O00634 580 aaPredicted RBP11.92□□□□□ -0.5
SCN3B-201ENST00000299333 FREM3P0C091 2139 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 NKAPP1Q8N9T2 125 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 FAM223BA6NKX1 122 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 SIPA1L1O43166 1804 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 WFDC2Q14508 124 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 SPINK13Q1W4C9 94 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 FAM223AQ8IWN6 122 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 RETNQ9HD89 108 aa11.92□□□□□ -0.5
SCN3B-201ENST00000299333 TRBV25-1A0A075B6N4 114 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 BAALC-AS2P0C853 105 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 A0A0G2JMZ2 1700 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 LRRC37A2A6NM11 1700 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 DOCK4Q8N1I0 1966 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 DEFB131AP59861 70 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 RNASE13Q5GAN3 156 aaKnown RBP11.91□□□□□ -0.5
SCN3B-201ENST00000299333 USMG5Q96IX5 58 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 DAZ1Q9NQZ3 744 aaKnown RBP11.91□□□□□ -0.5
SCN3B-201ENST00000299333 KIR2DL5BA0A0G2JN68 375 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 KIR2DL5BA0A0G2JPC4 375 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 KIR2DL5AQ8N109 375 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 A0A0B4J2C4 111 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 CFHR1Q03591 330 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 OOSP1A8MZH6 123 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 TAX1BP3O14907 124 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 CRYGCP07315 174 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 WFDC11Q8NEX6 87 aa11.91□□□□□ -0.5
SCN3B-201ENST00000299333 PSME4Q14997 1843 aa11.9□□□□□ -0.5
SCN3B-201ENST00000299333 SPTA1P02549 2419 aa11.9□□□□□ -0.51
SCN3B-201ENST00000299333 ZC2HC1AQ96GY0 325 aa11.9□□□□□ -0.51
SCN3B-201ENST00000299333 PRR25Q96S07 402 aa11.9□□□□□ -0.51
SCN3B-201ENST00000299333 HEATR1Q9H583 2144 aaKnown RBP11.89□□□□□ -0.51
SCN3B-201ENST00000299333 TMEM14BQ9NUH8 114 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 LYPD2Q6UXB3 125 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 RHODO00212 210 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 C14orf132Q9NPU4 83 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 E9PLN8 166 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 FOXI1Q12951 378 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 ZNRF2Q8NHG8 242 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 XCL2Q9UBD3 114 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 C8orf31Q8N9H6 132 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 ZNF747Q9BV97 191 aa11.89□□□□□ -0.51
SCN3B-201ENST00000299333 IGLL5B9A064 214 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 DOCK11Q5JSL3 2073 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 K7EN84 100 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 IGLV3-19P01714 112 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 VWCEQ96DN2 955 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 ABCA7Q8IZY2 2146 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 M0R1W7 72 aa11.88□□□□□ -0.51
SCN3B-201ENST00000299333 TEN1Q86WV5 123 aa11.87□□□□□ -0.51
SCN3B-201ENST00000299333 DOPEY2Q9Y3R5 2298 aa11.87□□□□□ -0.51
SCN3B-201ENST00000299333 MYOFQ9NZM1 2061 aa11.87□□□□□ -0.51
SCN3B-201ENST00000299333 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
SCN3B-201ENST00000299333 THAP8Q8NA92 274 aa11.87□□□□□ -0.51
SCN3B-201ENST00000299333 KLHL30-AS1Q8NEE0 82 aa11.87□□□□□ -0.51
SCN3B-201ENST00000299333 NDUFA4L2Q9NRX3 87 aa11.87□□□□□ -0.51
SCN3B-201ENST00000299333 C20orf173Q96LM9 149 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 F5H768 121 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 K7EMI3 77 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 NDUFB8O95169 186 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 CLPSP04118 112 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 CRYGBP07316 175 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 IGKV1-39P01597 117 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 IGKV1D-39P04432 117 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 MP68P56378 58 aa11.86□□□□□ -0.51
SCN3B-201ENST00000299333 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms