RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PLXNB3Q9ULL4 1909 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 B4DSR2 109 aa12.32□□□□□ -0.44
FNDC1-201ENST00000297267 HOXB4P17483 251 aaPredicted RBP12.32□□□□□ -0.44
FNDC1-201ENST00000297267 TRAV25A0A0B4J276 109 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 DEFB1P60022 68 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 RSPO1Q2MKA7 263 aaPredicted RBP12.31□□□□□ -0.44
FNDC1-201ENST00000297267 SUMO4Q6EEV6 95 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 DOCK10Q96BY6 2186 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 HLA-DRB4P13762 266 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 TMEM14BQ9NUH8 114 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 HLA-DRB4X5D2U9 266 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 GAGE2BQ13066 116 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 UBE2V1Q13404 147 aa12.31□□□□□ -0.44
FNDC1-201ENST00000297267 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.3□□□□□ -0.44
FNDC1-201ENST00000297267 IGKV2-29A2NJV5 120 aaPredicted RBP12.3□□□□□ -0.44
FNDC1-201ENST00000297267 NDUFA4L2Q9NRX3 87 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 AHCTF1Q8WYP5 2266 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 WT1-ASQ06250 92 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 COX11Q9Y6N1 276 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 A0A1B0GW64 132 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 SEC11AP67812 179 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
FNDC1-201ENST00000297267 DLX4Q92988 240 aaPredicted RBP12.3□□□□□ -0.44
FNDC1-201ENST00000297267 CEP250Q9BV73 2442 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 TRAV1-1A0A0B4J248 108 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 NPYP01303 97 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 V9GYV3 84 aa12.3□□□□□ -0.44
FNDC1-201ENST00000297267 AMTNQ6UX39 209 aa12.29□□□□□ -0.44
FNDC1-201ENST00000297267 A8MWP6 167 aa12.29□□□□□ -0.44
FNDC1-201ENST00000297267 IGF2BP2-AS1Q96M15 143 aa12.29□□□□□ -0.44
FNDC1-201ENST00000297267 CFHR4Q92496 578 aa12.29□□□□□ -0.44
FNDC1-201ENST00000297267 CACNA1EQ15878 2313 aa12.29□□□□□ -0.44
FNDC1-201ENST00000297267 TSSC4Q9Y5U2 329 aaPredicted RBP12.28□□□□□ -0.44
FNDC1-201ENST00000297267 FAM223BA6NKX1 122 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 M0R1W7 72 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 FAM223AQ8IWN6 122 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 DAZ1Q9NQZ3 744 aaKnown RBP12.28□□□□□ -0.44
FNDC1-201ENST00000297267 SIGLEC8Q9NYZ4 499 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 WT1P19544 449 aaPredicted RBP12.28□□□□□ -0.44
FNDC1-201ENST00000297267 CSRP1P21291 193 aaKnown RBP12.28□□□□□ -0.44
FNDC1-201ENST00000297267 RASL10AQ92737 203 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 TNFRSF14Q92956 283 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 NCKAP5O14513 1909 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 ZNF833PQ6ZTB9 187 aa12.28□□□□□ -0.44
FNDC1-201ENST00000297267 LINC01549A6NIU2 74 aa12.27□□□□□ -0.44
FNDC1-201ENST00000297267 MINOS1Q5TGZ0 78 aa12.27□□□□□ -0.44
FNDC1-201ENST00000297267 MINOS1-NBL1R4GNA1 71 aa12.27□□□□□ -0.44
FNDC1-201ENST00000297267 IGLL1P15814 213 aa12.27□□□□□ -0.44
FNDC1-201ENST00000297267 TCTEX1D4Q5JR98 221 aa12.27□□□□□ -0.45
FNDC1-201ENST00000297267 MSMBP08118 114 aa12.27□□□□□ -0.45
FNDC1-201ENST00000297267 NACAE9PAV3 2078 aa12.27□□□□□ -0.45
FNDC1-201ENST00000297267 LINC00173Q6ZV60 143 aa12.27□□□□□ -0.45
FNDC1-201ENST00000297267 CHD3Q12873 2000 aaKnown RBP12.26□□□□□ -0.45
FNDC1-201ENST00000297267 LINC01619G3V211 115 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 AKAP6Q13023 2319 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 IGLV3-9A0A075B6K5 115 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 WISP2O76076 250 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 C9orf139Q6ZV77 190 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 FGF23Q9GZV9 251 aaPredicted RBP12.26□□□□□ -0.45
FNDC1-201ENST00000297267 C1orf147Q96MC9 270 aaPredicted RBP12.26□□□□□ -0.45
FNDC1-201ENST00000297267 H3BMG7 143 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 DTX2Q86UW9 622 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 PRSS33Q8NF86 280 aa12.26□□□□□ -0.45
FNDC1-201ENST00000297267 TRBV19A0A075B6N1 114 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 TANC2Q9HCD6 1990 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
FNDC1-201ENST00000297267 SS18Q15532 418 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 FAM186AA6NE01 2351 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 C15orf65H3BRN8 121 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 C2orf66Q6UXQ4 117 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 DYNAPQ8N1N2 210 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 C3orf56Q8N813 242 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 WFDC11Q8NEX6 87 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 NOP10Q9NPE3 64 aaKnown RBP12.25□□□□□ -0.45
FNDC1-201ENST00000297267 ZNF407Q9C0G0 2248 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 CDK2AP2O75956 126 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 MRPL35Q9NZE8 188 aaKnown RBP12.25□□□□□ -0.45
FNDC1-201ENST00000297267 MYMXA0A1B0GTQ4 84 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
FNDC1-201ENST00000297267 PFN1P07737 140 aaKnown RBP12.24□□□□□ -0.45
FNDC1-201ENST00000297267 LGALS1P09382 135 aaKnown RBP12.24□□□□□ -0.45
FNDC1-201ENST00000297267 CGB3P0DN86 165 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 Q6ZS92 163 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 RPL39LQ96EH5 51 aaKnown RBP12.24□□□□□ -0.45
FNDC1-201ENST00000297267 NUPR1O60356 82 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 IGHV1-69DA0A0B4J2H0 117 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 SMIM27A0A1W2PRY6 76 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 IGHV1-69P01742 117 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 FXYD5Q96DB9 178 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 XCL1P47992 114 aa12.24□□□□□ -0.45
FNDC1-201ENST00000297267 DEFB4AO15263 64 aa12.23□□□□□ -0.45
FNDC1-201ENST00000297267 SLURP1P55000 103 aa12.23□□□□□ -0.45
FNDC1-201ENST00000297267 IGHG3P01860 377 aa12.23□□□□□ -0.45
FNDC1-201ENST00000297267 FGF6P10767 208 aa12.23□□□□□ -0.45
FNDC1-201ENST00000297267 DAD1P61803 113 aa12.23□□□□□ -0.45
FNDC1-201ENST00000297267 FAM104BQ5XKR9 115 aa12.23□□□□□ -0.45
FNDC1-201ENST00000297267 FOXL2NBQ6ZUU3 175 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms