RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TMEM74BQ9NUR3 256 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 BRCA1P38398 1863 aaKnown RBP9.33□□□□□ -0.92
SNIP1-201ENST00000296215 NTN3O00634 580 aaPredicted RBP9.33□□□□□ -0.92
SNIP1-201ENST00000296215 FOXF2Q12947 444 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 CLEC2BQ92478 149 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 RALGAPA1Q6GYQ0 2036 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 USP17L23D6RBM5 183 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 NDPQ00604 133 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 MLANAQ16655 118 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 ZNF826PQ6ZT77 177 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 PHIPQ8WWQ0 1821 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 IGKV3D-20A0A0C4DH25 116 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 BUB3O43684 328 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 DEFB104AQ8WTQ1 72 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 DOCK7Q96N67 2140 aa9.33□□□□□ -0.92
SNIP1-201ENST00000296215 SCRG1O75711 98 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 PRR20EP86478 221 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 PRR20CP86479 221 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 PRR20DP86480 221 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 PRR20BP86481 221 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 PRR20AP86496 221 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 ARHGEF17Q96PE2 2063 aaPredicted RBP9.32□□□□□ -0.92
SNIP1-201ENST00000296215 DSCAML1Q8TD84 2053 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 FOXE3Q13461 319 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 FANCD2OSQ96PS1 177 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 FOXS1O43638 330 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 PRB3Q04118 309 aaPredicted RBP9.32□□□□□ -0.92
SNIP1-201ENST00000296215 WISP1O95388 367 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 DYNAPQ8N1N2 210 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 HS3ST6Q96QI5 342 aa9.32□□□□□ -0.92
SNIP1-201ENST00000296215 TMEM89A2RUT3 159 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 LINC00473A8K010 186 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 INS-IGF2F8WCM5 200 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 TRBV6-6A0A0A6YYG2 114 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 GFERP55789 205 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 LINC00205P59089 165 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 C20orf204Q6ZNR8 217 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 TMEM133Q9H2Q1 129 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 DOPEY2Q9Y3R5 2298 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 NCOR1O75376 2440 aa9.31□□□□□ -0.92
SNIP1-201ENST00000296215 C1orf159Q96HA4 380 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 ZNF236Q9UL36 1845 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 F6UB75 175 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 TGFBR3LH3BV60 316 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 C9orf85Q96MD7 179 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 TSC2P49815 1807 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 INTS1Q8N201 2190 aaKnown RBP9.3□□□□□ -0.92
SNIP1-201ENST00000296215 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
SNIP1-201ENST00000296215 SPRY3O43610 288 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
SNIP1-201ENST00000296215 CD28P10747 220 aa9.3□□□□□ -0.92
SNIP1-201ENST00000296215 SNRPD3P62318 126 aaKnown RBP9.3□□□□□ -0.92
SNIP1-201ENST00000296215 ITGB4P16144 1822 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 DOCK1Q14185 1865 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 TMEM200BQ69YZ2 307 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 ARFGEF3Q5TH69 2177 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 TP53TG1Q9Y2A0 90 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 IGLV2-8P01709 118 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 PRB1P04280 392 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 CRYGAP11844 174 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 DCTN5Q9BTE1 182 aa9.29□□□□□ -0.92
SNIP1-201ENST00000296215 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
SNIP1-201ENST00000296215 DOCK5Q9H7D0 1870 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 PATJQ8NI35 1801 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 VPREB1P12018 145 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 FOLR3P41439 243 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 Q6ZT83 130 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 IL17DQ8TAD2 202 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 PRO0461Q9UI25 63 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 MBD6Q96DN6 1003 aa9.28□□□□□ -0.92
SNIP1-201ENST00000296215 IGHV5-51A0A0C4DH38 117 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 LEPROTO15243 131 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 NDUFB3O43676 98 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 P0DMU3 169 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 FAM231AP0DMU4 169 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 FAM231CP0DMU5 169 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 Q8TAT8 98 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 SHANK3Q9BYB0 1731 aa9.27□□□□□ -0.92
SNIP1-201ENST00000296215 SPTA1P02549 2419 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 PARP14Q460N5 1801 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 ZNF22P17026 224 aaPredicted RBP9.27□□□□□ -0.93
SNIP1-201ENST00000296215 NDUFA12Q9UI09 145 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 IGHV3-72A0A0B4J1Y9 119 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 TRAV26-2A0A0B4J265 109 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 VCYO14598 125 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 MRPS36P82909 103 aaKnown RBP9.27□□□□□ -0.93
SNIP1-201ENST00000296215 Q6P435 159 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 FXYD5Q96DB9 178 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 MYCNOSP40205 109 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.93
SNIP1-201ENST00000296215 QSER1Q2KHR3 1735 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 TRBV7-3A0A075B6L6 115 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 ITLN1Q8WWA0 313 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 TMEM141Q96I45 108 aa9.26□□□□□ -0.93
SNIP1-201ENST00000296215 ABCA1O95477 2261 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 428.6 ms