RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SHISA9B4DS77 424 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 GAGE6Q13070 117 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 LINC00311Q8N616 119 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 HEATR5AQ86XA9 2040 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 ANXA2RQ3ZCQ2 193 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 ZNRF2Q8NHG8 242 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 DOPEY2Q9Y3R5 2298 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 ESDP10768 282 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 C15orf65H3BRN8 121 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 IGHV2-5P01817 119 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 HIST1H4AP62805 103 aaKnown RBP13.78□□□□□ -0.2
SHANK1-201ENST00000293441 LGALS1P09382 135 aaKnown RBP13.78□□□□□ -0.2
SHANK1-201ENST00000293441 C1orf194Q5T5A4 169 aa13.78□□□□□ -0.2
SHANK1-201ENST00000293441 I3L3M4 83 aa13.77□□□□□ -0.2
SHANK1-201ENST00000293441 IGHV4-59P01825 116 aa13.77□□□□□ -0.2
SHANK1-201ENST00000293441 C3orf79P0CE67 100 aa13.77□□□□□ -0.2
SHANK1-201ENST00000293441 ZC2HC1BQ5TFG8 222 aa13.77□□□□□ -0.2
SHANK1-201ENST00000293441 ZNF134P52741 427 aa13.77□□□□□ -0.2
SHANK1-201ENST00000293441 NCOR1P1Q9H4R4 102 aa13.77□□□□□ -0.21
SHANK1-201ENST00000293441 ARFGEF3Q5TH69 2177 aa13.77□□□□□ -0.21
SHANK1-201ENST00000293441 TRAV26-2A0A0B4J265 109 aa13.77□□□□□ -0.21
SHANK1-201ENST00000293441 VWC2LB2RUY7 222 aa13.76□□□□□ -0.21
SHANK1-201ENST00000293441 H3BRN7 92 aa13.76□□□□□ -0.21
SHANK1-201ENST00000293441 PCP4P48539 62 aa13.76□□□□□ -0.21
SHANK1-201ENST00000293441 IGF2BP2-AS1Q96M15 143 aa13.76□□□□□ -0.21
SHANK1-201ENST00000293441 NUP210Q8TEM1 1887 aaPredicted RBP13.76□□□□□ -0.21
SHANK1-201ENST00000293441 DEFB113Q30KQ7 82 aa13.76□□□□□ -0.21
SHANK1-201ENST00000293441 TRAV8-3A0A0A6YYJ7 113 aa13.76□□□□□ -0.21
SHANK1-201ENST00000293441 WT1-ASQ06250 92 aa13.76□□□□□ -0.21
SHANK1-201ENST00000293441 ROS1P08922 2347 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 MRPL27Q9P0M9 148 aaKnown RBP13.75□□□□□ -0.21
SHANK1-201ENST00000293441 LURAP1LQ8IV03 231 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 THAP8Q8NA92 274 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 IGFBPL1Q8WX77 278 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 TSSC4Q9Y5U2 329 aaPredicted RBP13.75□□□□□ -0.21
SHANK1-201ENST00000293441 PRSS46E5RG02 174 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 RIF1Q5UIP0 2472 aaKnown RBP13.75□□□□□ -0.21
SHANK1-201ENST00000293441 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 PFN2P35080 140 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 PMVKQ15126 192 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 TMEM243Q9BU79 118 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 ANAPC10Q9UM13 185 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 KIF26AQ9ULI4 1882 aaPredicted RBP13.75□□□□□ -0.21
SHANK1-201ENST00000293441 CYYR1Q96J86 154 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 VPREB3Q9UKI3 123 aa13.75□□□□□ -0.21
SHANK1-201ENST00000293441 ABCA4P78363 2273 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 PKDREJQ9NTG1 2253 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 C22orf46C9J442 243 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 ZNF492Q9P255 531 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 EREGO14944 169 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 ELANEP08246 267 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 CGB7P0DN87 165 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 NKAPP1Q8N9T2 125 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 KLF12Q9Y4X4 402 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 NOTCH4Q99466 2003 aa13.74□□□□□ -0.21
SHANK1-201ENST00000293441 IGKV1-39P01597 117 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 IGKV1D-39P04432 117 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 VWC2Q2TAL6 325 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 DEFB136Q30KP8 78 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 SLX1AQ9BQ83 275 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 RSPO1Q2MKA7 263 aaPredicted RBP13.73□□□□□ -0.21
SHANK1-201ENST00000293441 CHAC1Q9BUX1 264 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 CLPSL2Q6UWE3 100 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 ZNF114Q8NC26 417 aa13.73□□□□□ -0.21
SHANK1-201ENST00000293441 CCL24O00175 119 aa13.72□□□□□ -0.21
SHANK1-201ENST00000293441 IGHV2-70P01814 119 aa13.72□□□□□ -0.21
SHANK1-201ENST00000293441 WNK2Q9Y3S1 2297 aa13.72□□□□□ -0.21
SHANK1-201ENST00000293441 HAPLN4Q86UW8 402 aa13.72□□□□□ -0.21
SHANK1-201ENST00000293441 NEGR1Q7Z3B1 354 aa13.72□□□□□ -0.21
SHANK1-201ENST00000293441 KMT2EQ8IZD2 1858 aa13.72□□□□□ -0.21
SHANK1-201ENST00000293441 CFPP27918 469 aa13.72□□□□□ -0.21
SHANK1-201ENST00000293441 DLX4Q92988 240 aaPredicted RBP13.72□□□□□ -0.21
SHANK1-201ENST00000293441 STPG4Q8N801 248 aa13.71□□□□□ -0.21
SHANK1-201ENST00000293441 OVOL2Q9BRP0 275 aa13.71□□□□□ -0.21
SHANK1-201ENST00000293441 C1orf147Q96MC9 270 aaPredicted RBP13.71□□□□□ -0.21
SHANK1-201ENST00000293441 PRR25Q96S07 402 aa13.71□□□□□ -0.21
SHANK1-201ENST00000293441 C2orf66Q6UXQ4 117 aa13.71□□□□□ -0.22
SHANK1-201ENST00000293441 TMEM141Q96I45 108 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 CTSZQ9UBR2 303 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 IGHV4-30-2A0A087WSY4 118 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 FAM104BQ5XKR9 115 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 KAAG1Q9UBP8 84 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 SDHAF1A6NFY7 115 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 SPRNQ5BIV9 151 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 HLA-DRB4P13762 266 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 HLA-DRB4X5D2U9 266 aa13.7□□□□□ -0.22
SHANK1-201ENST00000293441 ZNF48Q96MX3 618 aaPredicted RBP13.69□□□□□ -0.22
SHANK1-201ENST00000293441 DOCK10Q96BY6 2186 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 MRPL51Q4U2R6 128 aaKnown RBP13.69□□□□□ -0.22
SHANK1-201ENST00000293441 GAGE2EQ4V326 116 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 ASPHD1Q5U4P2 390 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 GAGE2DQ9UEU5 116 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 A0A0J9YY99 117 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 ANGP03950 147 aaKnown RBP13.69□□□□□ -0.22
SHANK1-201ENST00000293441 Q8N8P6 123 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 NRGNQ92686 78 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 ANAPC13Q9BS18 74 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 IGHV4-61A0A0C4DH41 118 aa13.69□□□□□ -0.22
SHANK1-201ENST00000293441 NXPH4O95158 308 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 377 ms