RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CITED1Q99966 193 aa11.24□□□□□ -0.61
TNFRSF11A-201ENST00000269485 ANAPC13Q9BS18 74 aa11.24□□□□□ -0.61
TNFRSF11A-201ENST00000269485 C9orf118A6NHY6 69 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 C8orf88P0DMB2 117 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 HIGD1CA8MV81 97 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 CGB3P0DN86 165 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 CGB7P0DN87 165 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 SEC11AP67812 179 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 NPFFR1Q9GZQ6 430 aa11.23□□□□□ -0.61
TNFRSF11A-201ENST00000269485 SPINK8P0C7L1 97 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 SMIM20Q8N5G0 67 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 MRPL27Q9P0M9 148 aaKnown RBP11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 V9GYV3 84 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 F8P00451 2351 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 GATA3P23771 443 aa11.22□□□□□ -0.61
TNFRSF11A-201ENST00000269485 RPS20P60866 119 aaKnown RBP11.21□□□□□ -0.61
TNFRSF11A-201ENST00000269485 HERV-K104P63124 156 aa11.21□□□□□ -0.61
TNFRSF11A-201ENST00000269485 FAM162BQ5T6X4 162 aa11.21□□□□□ -0.61
TNFRSF11A-201ENST00000269485 CIARTQ8N365 385 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF11A-201ENST00000269485 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
TNFRSF11A-201ENST00000269485 TTTY13Q9BZ97 58 aa11.21□□□□□ -0.61
TNFRSF11A-201ENST00000269485 IGHV4-61A0A0C4DH41 118 aa11.21□□□□□ -0.62
TNFRSF11A-201ENST00000269485 NEU4Q8WWR8 484 aaPredicted RBP11.21□□□□□ -0.62
TNFRSF11A-201ENST00000269485 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.62
TNFRSF11A-201ENST00000269485 RNF223E7ERA6 249 aa11.21□□□□□ -0.62
TNFRSF11A-201ENST00000269485 H3BVH4 76 aa11.21□□□□□ -0.62
TNFRSF11A-201ENST00000269485 NBR2O15453 112 aa11.21□□□□□ -0.62
TNFRSF11A-201ENST00000269485 RABAC1Q9UI14 185 aa11.21□□□□□ -0.62
TNFRSF11A-201ENST00000269485 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 A0A1W2PRX2 142 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 IZUMO1RA6ND01 250 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 WFDC2Q14508 124 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 DDB2Q92466 427 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 HIGD1AQ9Y241 93 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 EIF4EBP1Q13541 118 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 BOD1L2Q8IYS8 172 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 AGRNO00468 2067 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 GGTLC3B5MD39 225 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 H3BUX3 64 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 Q8N7P7 452 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 MRAP2Q96G30 205 aa11.2□□□□□ -0.62
TNFRSF11A-201ENST00000269485 STAG3L2P0CL84 134 aa11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 CSN1S1P47710 185 aa11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 OR5AN1Q8NGI8 311 aa11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 ZNF418Q8TF45 676 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 IGHV4-30-2A0A087WSY4 118 aa11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 ITLN2Q8WWU7 325 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 C18orf15Q96N68 181 aa11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 DUX3Q96PT4 197 aa11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.62
TNFRSF11A-201ENST00000269485 LOC107984156A0A0G2JMH3 177 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 A8MWL6 223 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 H3BMG7 143 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 ORM1P02763 201 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 IGHV4-38-2P0DP08 117 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 C15orf32Q32M92 178 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 SHISA2Q6UWI4 295 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 ARL17AQ8IVW1 177 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 MXRA5Q9NR99 2828 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 A0A1W2PPM0 123 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 C2orf70A6NJV1 201 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 APOHP02749 345 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 SRSF2Q01130 221 aaKnown RBP11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 NDUFA4L2Q9NRX3 87 aa11.18□□□□□ -0.62
TNFRSF11A-201ENST00000269485 INSL3P51460 131 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 TMEM75Q8N9X5 138 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 TXNDC17Q9BRA2 123 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 P0C879 139 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 NUP35Q8NFH5 326 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 AP5S1Q9NUS5 200 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 H3BRM9 83 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 BLCAPP62952 87 aa11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 BBC3Q96PG8 261 aaPredicted RBP11.17□□□□□ -0.62
TNFRSF11A-201ENST00000269485 IGHV4-39P01824 125 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 GDF5OSQ5U4N7 250 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 CCDC144NLQ6NUI1 221 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 ZNF833PQ6ZTB9 187 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 C3orf56Q8N813 242 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 OSTCQ9NRP0 149 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 TMEM167BQ9NRX6 74 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 UFC1Q9Y3C8 167 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 PRSS1P07477 247 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 CACNG7P62955 275 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 NBPF19A0A087WUL8 3843 aa11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 BEX4Q9NWD9 120 aaPredicted RBP11.16□□□□□ -0.62
TNFRSF11A-201ENST00000269485 ATP6V0E1O15342 81 aa11.15□□□□□ -0.62
TNFRSF11A-201ENST00000269485 APOMO95445 188 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms