RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 SHISA2Q6UWI4 295 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 TTC9CQ8N5M4 171 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 OR4C13Q8NGP0 309 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 COL27A1Q8IZC6 1860 aaPredicted RBP12.99□□□□□ -0.33
VSX2-201ENST00000261980 KLF17Q5JT82 389 aaPredicted RBP12.99□□□□□ -0.33
VSX2-201ENST00000261980 PRO0461Q9UI25 63 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 ZFYVE26Q68DK2 2539 aa12.98□□□□□ -0.33
VSX2-201ENST00000261980 KLRC4-KLRK1H3BQV0 150 aa12.98□□□□□ -0.33
VSX2-201ENST00000261980 SPRY2O43597 315 aa12.98□□□□□ -0.33
VSX2-201ENST00000261980 GAFA1Q96PS6 74 aa12.98□□□□□ -0.33
VSX2-201ENST00000261980 EGR2P11161 476 aaPredicted RBP12.98□□□□□ -0.33
VSX2-201ENST00000261980 SMCPP49901 116 aaPredicted RBP12.98□□□□□ -0.33
VSX2-201ENST00000261980 Q6ZUT4 128 aa12.98□□□□□ -0.33
VSX2-201ENST00000261980 C9orf106Q8NAJ2 232 aa12.98□□□□□ -0.33
VSX2-201ENST00000261980 RASL11BQ9BPW5 248 aa12.98□□□□□ -0.33
VSX2-201ENST00000261980 HLA-DMBP28068 263 aa12.97□□□□□ -0.33
VSX2-201ENST00000261980 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
VSX2-201ENST00000261980 ATRXP46100 2492 aa12.97□□□□□ -0.33
VSX2-201ENST00000261980 NBASA2RRP1 2371 aa12.97□□□□□ -0.33
VSX2-201ENST00000261980 DPM2O94777 84 aa12.97□□□□□ -0.33
VSX2-201ENST00000261980 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
VSX2-201ENST00000261980 IL4P05112 153 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 PAX8Q06710 450 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 MAP1LC3AQ9H492 121 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 LRBAP50851 2863 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 EPG5Q9HCE0 2579 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 LINC01549A6NIU2 74 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 HLA-DRB4P13762 266 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.33
VSX2-201ENST00000261980 NGBQ9NPG2 151 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.33
VSX2-201ENST00000261980 TRBV19A0A075B6N1 114 aa12.96□□□□□ -0.34
VSX2-201ENST00000261980 IGHV3-23P01764 117 aa12.96□□□□□ -0.34
VSX2-201ENST00000261980 TMEM167AQ8TBQ9 72 aa12.96□□□□□ -0.34
VSX2-201ENST00000261980 TNFAIP6P98066 277 aaPredicted RBP12.95□□□□□ -0.34
VSX2-201ENST00000261980 MALRD1Q5VYJ5 2156 aa12.95□□□□□ -0.34
VSX2-201ENST00000261980 TNFRSF6BO95407 300 aa12.95□□□□□ -0.34
VSX2-201ENST00000261980 NBL1P41271 181 aa12.95□□□□□ -0.34
VSX2-201ENST00000261980 SIGLEC15Q6ZMC9 328 aa12.95□□□□□ -0.34
VSX2-201ENST00000261980 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
VSX2-201ENST00000261980 RNF7Q9UBF6 113 aa12.95□□□□□ -0.34
VSX2-201ENST00000261980 IGLV2-23P01705 113 aa12.94□□□□□ -0.34
VSX2-201ENST00000261980 RPL27AP46776 148 aaKnown RBP12.94□□□□□ -0.34
VSX2-201ENST00000261980 C3orf56Q8N813 242 aa12.94□□□□□ -0.34
VSX2-201ENST00000261980 RPEQ96AT9 228 aa12.94□□□□□ -0.34
VSX2-201ENST00000261980 TRGV9Q99603 122 aa12.94□□□□□ -0.34
VSX2-201ENST00000261980 PRTN3P24158 256 aa12.94□□□□□ -0.34
VSX2-201ENST00000261980 PROCRQ9UNN8 238 aa12.94□□□□□ -0.34
VSX2-201ENST00000261980 EMP1P54849 157 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 PLGLAQ15195 96 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 C1orf122Q6ZSJ8 110 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 C1QTNF4Q9BXJ3 329 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 ATP5IP56385 69 aaPredicted RBP12.93□□□□□ -0.34
VSX2-201ENST00000261980 FBXL15Q9H469 300 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 VMA21Q3ZAQ7 101 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 MORN3Q6PF18 240 aaPredicted RBP12.93□□□□□ -0.34
VSX2-201ENST00000261980 ZNF493Q6ZR52 646 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
VSX2-201ENST00000261980 HIGD1BQ9P298 99 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
VSX2-201ENST00000261980 SPTA1P02549 2419 aa12.93□□□□□ -0.34
VSX2-201ENST00000261980 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
VSX2-201ENST00000261980 SMIM20Q8N5G0 67 aa12.92□□□□□ -0.34
VSX2-201ENST00000261980 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
VSX2-201ENST00000261980 HERV-K104P63124 156 aa12.92□□□□□ -0.34
VSX2-201ENST00000261980 SCGB1D4Q6XE38 83 aa12.92□□□□□ -0.34
VSX2-201ENST00000261980 VKORC1Q9BQB6 163 aa12.92□□□□□ -0.34
VSX2-201ENST00000261980 LHBP01229 141 aa12.91□□□□□ -0.34
VSX2-201ENST00000261980 IGKV1-17P01599 117 aa12.91□□□□□ -0.34
VSX2-201ENST00000261980 SRSF6Q13247 344 aaKnown RBP12.91□□□□□ -0.34
VSX2-201ENST00000261980 TMEM200BQ69YZ2 307 aa12.91□□□□□ -0.34
VSX2-201ENST00000261980 CCL17Q92583 94 aa12.91□□□□□ -0.34
VSX2-201ENST00000261980 NCBP2LA6PVI3 153 aaKnown RBP12.91□□□□□ -0.34
VSX2-201ENST00000261980 H7C2G1 150 aa12.91□□□□□ -0.34
VSX2-201ENST00000261980 TRGV3P03979 118 aa12.91□□□□□ -0.34
VSX2-201ENST00000261980 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
VSX2-201ENST00000261980 U3KQK5 164 aa12.91□□□□□ -0.34
VSX2-201ENST00000261980 CUBNO60494 3623 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 ABCA4P78363 2273 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 AKAP6Q13023 2319 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 IGHV3OR16-13A0A075B7E8 117 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 IGHV3-74A0A0B4J1X5 117 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 J3KRW8 73 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 ERCC8Q13216 396 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 KLHL30-AS1Q8NEE0 82 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 RNF185Q96GF1 192 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 CARD19Q96LW7 228 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 RAB9BQ9NP90 201 aa12.9□□□□□ -0.34
VSX2-201ENST00000261980 FCN3O75636 299 aa12.9□□□□□ -0.35
VSX2-201ENST00000261980 MZT1Q08AG7 82 aa12.9□□□□□ -0.35
VSX2-201ENST00000261980 Q6ZQT7 251 aa12.9□□□□□ -0.35
VSX2-201ENST00000261980 SCNM1Q9BWG6 230 aa12.9□□□□□ -0.35
VSX2-201ENST00000261980 ERG28Q9UKR5 140 aa12.9□□□□□ -0.35
VSX2-201ENST00000261980 CFAP126Q5VTH2 177 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 C22orf34Q6ZV56 151 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 A0A1B0GW15 77 aa12.89□□□□□ -0.35
VSX2-201ENST00000261980 TSPAN13O95857 204 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms