RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 C15orf53Q8NAA6 179 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 LY6G5BQ8NDX9 201 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 FAM120AOSQ5T036 256 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 CFAP161Q6P656 301 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 ITLN2Q8WWU7 325 aaPredicted RBP11.05□□□□□ -0.64
HCFC2-201ENST00000229330 YPEL4Q96NS1 127 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 TRBV25-1A0A075B6N4 114 aa11.05□□□□□ -0.64
HCFC2-201ENST00000229330 SRD5A1P18405 259 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 WT1-ASQ06250 92 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 INAFM2P0DMQ5 153 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 BOD1L2Q8IYS8 172 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 C11orf1Q9H5F2 150 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 WFDC2Q14508 124 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 TMEM86BQ8N661 226 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 FER1L5A0AVI2 2057 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 ZNF833PQ6ZTB9 187 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 DTX2Q86UW9 622 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 NTN5Q8WTR8 489 aaPredicted RBP11.04□□□□□ -0.64
HCFC2-201ENST00000229330 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 TRAV26-2A0A0B4J265 109 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 SMIM20Q8N5G0 67 aa11.04□□□□□ -0.64
HCFC2-201ENST00000229330 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
HCFC2-201ENST00000229330 EFNA4P52798 201 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 C17orf58Q2M2W7 97 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 A0A087WWL8 130 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 ZNF134P52741 427 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 NDPQ00604 133 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 CACNA1GO43497 2377 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 LEPROTO15243 131 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 IGF2BP2-AS1Q96M15 143 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 LY6G6EA0A0G2JKS1 128 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 ANXA2RQ3ZCQ2 193 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 MORN5Q5VZ52 161 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 U3KQA8 63 aa11.03□□□□□ -0.64
HCFC2-201ENST00000229330 ADARB2-AS1A8MUL3 147 aa11.02□□□□□ -0.64
HCFC2-201ENST00000229330 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.64
HCFC2-201ENST00000229330 SMIM2Q9BVW6 85 aa11.02□□□□□ -0.64
HCFC2-201ENST00000229330 H3BRN7 92 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 FRMD6-AS1P0C7T7 363 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 RBX1P62877 108 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 POU2AF1Q16633 256 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 SHANK1Q9Y566 2161 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 ROS1P08922 2347 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 TRAV26-1A0A087WT03 109 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 ZNF503-AS2A6NEH8 195 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 UTF1Q5T230 341 aa11.02□□□□□ -0.65
HCFC2-201ENST00000229330 K7EM74 188 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 Q6ZSR3 168 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 TRAV41A0A0B4J266 112 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 PAX4O43316 350 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 TRACP01848 142 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 TRBV7-1A0A0A6YYK4 115 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 IGHV3-73A0A0B4J1V6 119 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 FXYD2P54710 66 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 PROK2Q9HC23 129 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 LY6DQ14210 128 aa11.01□□□□□ -0.65
HCFC2-201ENST00000229330 TRGV2A0A075B6R0 118 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 Q6ZR03 302 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 CARD19Q96LW7 228 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 POLEQ07864 2286 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 SHISA9B4DS77 424 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 CRYBA4P53673 196 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 INTS1Q8N201 2190 aaKnown RBP11□□□□□ -0.65
HCFC2-201ENST00000229330 OOSP1A8MZH6 123 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 LYPD2Q6UXB3 125 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 ZNF625Q96I27 306 aaPredicted RBP11□□□□□ -0.65
HCFC2-201ENST00000229330 HIGD1BQ9P298 99 aa11□□□□□ -0.65
HCFC2-201ENST00000229330 KLRD1Q13241 179 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 PRIMA1Q86XR5 153 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 DNAJC30Q96LL9 226 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 LINC00527Q9UJ94 153 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 COL6A6A6NMZ7 2263 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 NDUFB8O95169 186 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 TRPT1Q86TN4 253 aaKnown RBP10.99□□□□□ -0.65
HCFC2-201ENST00000229330 J3QQQ9 107 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 ANKRD29Q8N6D5 301 aa10.99□□□□□ -0.65
HCFC2-201ENST00000229330 PRSS29PA6NIE9 313 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 SPANXCQ9NY87 97 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 VMO1Q7Z5L0 202 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 NBASA2RRP1 2371 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 SPTBN1Q01082 2364 aaKnown RBP10.98□□□□□ -0.65
HCFC2-201ENST00000229330 CFC1BP0CG36 223 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 CFC1P0CG37 223 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 FOXI1Q12951 378 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 MINOS1Q5TGZ0 78 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 TEN1Q86WV5 123 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 MINOS1-NBL1R4GNA1 71 aa10.98□□□□□ -0.65
HCFC2-201ENST00000229330 C2orf70A6NJV1 201 aa10.97□□□□□ -0.65
HCFC2-201ENST00000229330 IGHG3P01860 377 aa10.97□□□□□ -0.65
HCFC2-201ENST00000229330 IGHG4P01861 327 aa10.97□□□□□ -0.65
HCFC2-201ENST00000229330 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
HCFC2-201ENST00000229330 MALP21145 153 aa10.97□□□□□ -0.65
HCFC2-201ENST00000229330 SOCS3O14543 225 aa10.96□□□□□ -0.65
HCFC2-201ENST00000229330 ZNF672Q499Z4 452 aaPredicted RBP10.96□□□□□ -0.65
HCFC2-201ENST00000229330 MYO7BQ6PIF6 2116 aa10.96□□□□□ -0.65
HCFC2-201ENST00000229330 FGF23Q9GZV9 251 aaPredicted RBP10.96□□□□□ -0.65
HCFC2-201ENST00000229330 Q6ZS92 163 aa10.96□□□□□ -0.65
HCFC2-201ENST00000229330 TPSG1Q9NRR2 321 aa10.96□□□□□ -0.65
HCFC2-201ENST00000229330 AKAP6Q13023 2319 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms