RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 FAM104BQ5XKR9 115 aa11.71□□□□□ -0.54
UBE2D4-201ENST00000222402 CCL19Q99731 98 aa11.71□□□□□ -0.54
UBE2D4-201ENST00000222402 TRAV41A0A0B4J266 112 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 FSTL3O95633 263 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 HIST1H1AQ02539 215 aaPredicted RBP11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 MYOZ3Q8TDC0 251 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 COL25A1Q9BXS0 654 aaPredicted RBP11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 C7orf69Q9H7B7 122 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 MRPS16Q9Y3D3 137 aaKnown RBP11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 WI2-2373I1.2A0A1W2PRP0 233 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 M0R381 172 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 SMIM17P0DL12 118 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 PAX8Q06710 450 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 IFI27L1Q96BM0 104 aa11.7□□□□□ -0.54
UBE2D4-201ENST00000222402 A0A087X0K7 114 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 C7orf71A4D174 169 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 KLK15Q9H2R5 256 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 Q6ZVH6 145 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 EGR2P11161 476 aaPredicted RBP11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 LEPP41159 167 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 Q8N9W7 124 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 C2orf70A6NJV1 201 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 F5H697 171 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 MRPL51Q4U2R6 128 aaKnown RBP11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 GLMPQ8WWB7 406 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 MOB4Q9Y3A3 225 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 CBY1Q9Y3M2 126 aa11.69□□□□□ -0.54
UBE2D4-201ENST00000222402 FBLN7Q53RD9 439 aa11.68□□□□□ -0.54
UBE2D4-201ENST00000222402 IL17RELQ6ZVW7 336 aa11.68□□□□□ -0.54
UBE2D4-201ENST00000222402 Q71RC1 249 aaPredicted RBP11.68□□□□□ -0.54
UBE2D4-201ENST00000222402 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
UBE2D4-201ENST00000222402 PHLDA3Q9Y5J5 127 aa11.68□□□□□ -0.54
UBE2D4-201ENST00000222402 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
UBE2D4-201ENST00000222402 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 USP9YO00507 2555 aaPredicted RBP11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 ODF3BA8MYP8 253 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 PAX1P15863 534 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 MS4A6AQ9H2W1 248 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 A6NDN8 102 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 TMEM97Q5BJF2 176 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 VPS25Q9BRG1 176 aa11.67□□□□□ -0.54
UBE2D4-201ENST00000222402 H3BVH4 76 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 KHDC1LQ5JSQ8 128 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 PRSS57Q6UWY2 283 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 PPBPP02775 128 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 PAX2Q02962 417 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 FOXC2Q99958 501 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 TRBV7-1A0A0A6YYK4 115 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 A1L4Q6 167 aa11.66□□□□□ -0.54
UBE2D4-201ENST00000222402 ASPMQ8IZT6 3477 aa11.65□□□□□ -0.54
UBE2D4-201ENST00000222402 H3BUX3 64 aa11.65□□□□□ -0.54
UBE2D4-201ENST00000222402 NPYP01303 97 aa11.65□□□□□ -0.54
UBE2D4-201ENST00000222402 TMEM160Q9NX00 188 aa11.65□□□□□ -0.54
UBE2D4-201ENST00000222402 CFAP47Q6ZTR5 3102 aa11.65□□□□□ -0.54
UBE2D4-201ENST00000222402 SRD5A1P18405 259 aa11.65□□□□□ -0.55
UBE2D4-201ENST00000222402 DTX2Q86UW9 622 aa11.65□□□□□ -0.55
UBE2D4-201ENST00000222402 MSRB1Q9NZV6 116 aa11.65□□□□□ -0.55
UBE2D4-201ENST00000222402 DMXL2Q8TDJ6 3036 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 NPIPB6E9PJ23 425 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 GCSHP23434 173 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 CTRLP40313 264 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 Q8N976 141 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 ZNF747Q9BV97 191 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 CRIP1P50238 77 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 NXT2Q9NPJ8 142 aaKnown RBP11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 TP73-AS1Q9UF72 201 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 PRAC2D3DTV9 90 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 ZNF502Q8TBZ5 544 aa11.64□□□□□ -0.55
UBE2D4-201ENST00000222402 IGKV3-20P01619 116 aa11.63□□□□□ -0.55
UBE2D4-201ENST00000222402 CENPVL3A0A0U1RRI6 287 aa11.63□□□□□ -0.55
UBE2D4-201ENST00000222402 C8orf86Q6ZUL3 223 aa11.63□□□□□ -0.55
UBE2D4-201ENST00000222402 SIRPDQ9H106 197 aa11.63□□□□□ -0.55
UBE2D4-201ENST00000222402 MYO18BQ8IUG5 2567 aa11.63□□□□□ -0.55
UBE2D4-201ENST00000222402 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
UBE2D4-201ENST00000222402 RNASE4P34096 147 aaKnown RBP11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 C21orf62-AS1Q17RA5 79 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 LINC01548A6NM66 108 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 C11orf71Q6IPW1 123 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 TRBV6-1A0A0K0K1D8 114 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 GAGE10A6NGK3 116 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 BUB3O43684 328 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 TNFRSF6BO95407 300 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 AGPAT4-IT1Q9H0P7 198 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 SORL1Q92673 2214 aa11.62□□□□□ -0.55
UBE2D4-201ENST00000222402 FAM106AQ4KMX7 169 aa11.61□□□□□ -0.55
UBE2D4-201ENST00000222402 NPFFR1Q9GZQ6 430 aa11.61□□□□□ -0.55
UBE2D4-201ENST00000222402 TRAV8-6A0A0B4J262 113 aa11.61□□□□□ -0.55
UBE2D4-201ENST00000222402 HTN1P15515 57 aa11.61□□□□□ -0.55
UBE2D4-201ENST00000222402 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
UBE2D4-201ENST00000222402 ASIPP42127 132 aa11.61□□□□□ -0.55
UBE2D4-201ENST00000222402 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
UBE2D4-201ENST00000222402 IGHV1-69DA0A0B4J2H0 117 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 IGHV1-69P01742 117 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 ID1P41134 155 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 LCNL1Q6ZST4 164 aa11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 LOXL1Q08397 574 aaPredicted RBP11.6□□□□□ -0.55
UBE2D4-201ENST00000222402 TMEM158Q8WZ71 300 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms