RNA–Protein interactions for RNA: ENST00000220003.13

CSK-201, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSK, Length 2,767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-201ENST00000220003 GOLT1AQ6ZVE7 132 aa14.58□□□□□ -0.07
CSK-201ENST00000220003 VGLL1Q99990 258 aa14.58□□□□□ -0.07
CSK-201ENST00000220003 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.57□□□□□ -0.08
CSK-201ENST00000220003 CKS1BP61024 79 aa14.57□□□□□ -0.08
CSK-201ENST00000220003 PRORYQ9H606 182 aa14.57□□□□□ -0.08
CSK-201ENST00000220003 DKK2Q9UBU2 259 aa14.57□□□□□ -0.08
CSK-201ENST00000220003 GP9P14770 177 aa14.57□□□□□ -0.08
CSK-201ENST00000220003 OR4C13Q8NGP0 309 aa14.57□□□□□ -0.08
CSK-201ENST00000220003 SPANXB1Q9NS25 103 aaPredicted RBP14.57□□□□□ -0.08
CSK-201ENST00000220003 ZNF462Q96JM2 2506 aa14.57□□□□□ -0.08
CSK-201ENST00000220003 SCGB2A2Q13296 93 aa14.56□□□□□ -0.08
CSK-201ENST00000220003 EXOC3-AS1Q8N2X6 119 aa14.56□□□□□ -0.08
CSK-201ENST00000220003 THAP8Q8NA92 274 aa14.56□□□□□ -0.08
CSK-201ENST00000220003 SH2D6Q7Z4S9 175 aa14.56□□□□□ -0.08
CSK-201ENST00000220003 ZNF785A8K8V0 405 aa14.56□□□□□ -0.08
CSK-201ENST00000220003 NHP2Q9NX24 153 aaKnown RBP14.56□□□□□ -0.08
CSK-201ENST00000220003 LRRK2Q5S007 2527 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 TRAV26-1A0A087WT03 109 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 MRGPRG-AS1Q2M3A8 158 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 MTURNQ8N3F0 131 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 OSR1Q8TAX0 266 aaPredicted RBP14.55□□□□□ -0.08
CSK-201ENST00000220003 FBXL15Q9H469 300 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 IGLV2-11P01706 119 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 ARPC1AQ92747 370 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 IFI27L1Q96BM0 104 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 RAB1BQ9H0U4 201 aa14.55□□□□□ -0.08
CSK-201ENST00000220003 IGKV2D-26A0A0A0MRZ7 120 aa14.54□□□□□ -0.08
CSK-201ENST00000220003 A0A1W2PPI3 338 aa14.54□□□□□ -0.08
CSK-201ENST00000220003 PRELID3AQ96N28 172 aa14.54□□□□□ -0.08
CSK-201ENST00000220003 HBDP02042 147 aa14.54□□□□□ -0.08
CSK-201ENST00000220003 ETDBQ3ZM63 59 aa14.54□□□□□ -0.08
CSK-201ENST00000220003 IGHV1-3A0A0C4DH29 117 aa14.53□□□□□ -0.08
CSK-201ENST00000220003 BUB1B-PAK6H3BSN5 160 aa14.53□□□□□ -0.08
CSK-201ENST00000220003 IGLV1-47P01700 117 aa14.53□□□□□ -0.08
CSK-201ENST00000220003 AMN1Q8IY45 258 aa14.53□□□□□ -0.08
CSK-201ENST00000220003 SPAG8Q99932 426 aaPredicted RBP14.53□□□□□ -0.08
CSK-201ENST00000220003 SPATA25Q9BR10 227 aa14.53□□□□□ -0.08
CSK-201ENST00000220003 CHAC1Q9BUX1 264 aa14.53□□□□□ -0.08
CSK-201ENST00000220003 S4R3C0 116 aa14.53□□□□□ -0.08
CSK-201ENST00000220003 TMEM213A2RRL7 107 aa14.52□□□□□ -0.08
CSK-201ENST00000220003 J3QR89 54 aa14.52□□□□□ -0.08
CSK-201ENST00000220003 C11orf71Q6IPW1 123 aa14.52□□□□□ -0.08
CSK-201ENST00000220003 FOXI2Q6ZQN5 318 aa14.52□□□□□ -0.08
CSK-201ENST00000220003 ZFP36P26651 326 aaKnown RBP14.52□□□□□ -0.09
CSK-201ENST00000220003 PHLDA1Q8WV24 401 aaPredicted RBP14.52□□□□□ -0.09
CSK-201ENST00000220003 ITLN2Q8WWU7 325 aaPredicted RBP14.52□□□□□ -0.09
CSK-201ENST00000220003 RPEQ96AT9 228 aa14.52□□□□□ -0.09
CSK-201ENST00000220003 SUB1P53999 127 aaKnown RBP eCLIP14.51□□□□□ -0.09
CSK-201ENST00000220003 ATP5G2Q06055 141 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 TMSB15BA0A087X1C1 80 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 SMKR1H3BMG3 65 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 H3BMG7 143 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 PRB1P04280 392 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 CRYBA4P53673 196 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 GATD1Q8NB37 220 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 ZANQ9Y493 2812 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 TIMM23O14925 209 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 INSL3P51460 131 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 OTORQ9NRC9 128 aa14.51□□□□□ -0.09
CSK-201ENST00000220003 USP9YO00507 2555 aaPredicted RBP14.5□□□□□ -0.09
CSK-201ENST00000220003 K7EQM0 130 aa14.5□□□□□ -0.09
CSK-201ENST00000220003 LINC00311Q8N616 119 aa14.5□□□□□ -0.09
CSK-201ENST00000220003 TMEM167AQ8TBQ9 72 aa14.5□□□□□ -0.09
CSK-201ENST00000220003 AMTNQ6UX39 209 aa14.5□□□□□ -0.09
CSK-201ENST00000220003 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.5□□□□□ -0.091e-10■■■■□ 23.4
CSK-201ENST00000220003 PLGLAQ15195 96 aa14.49□□□□□ -0.09
CSK-201ENST00000220003 ORMDL3Q8N138 153 aa14.49□□□□□ -0.09
CSK-201ENST00000220003 F8W1H4 67 aa14.49□□□□□ -0.09
CSK-201ENST00000220003 DYNAPQ8N1N2 210 aa14.49□□□□□ -0.09
CSK-201ENST00000220003 TMEM30BQ3MIR4 351 aa14.48□□□□□ -0.09
CSK-201ENST00000220003 VMA21Q3ZAQ7 101 aa14.48□□□□□ -0.09
CSK-201ENST00000220003 KLF17Q5JT82 389 aaPredicted RBP14.48□□□□□ -0.09
CSK-201ENST00000220003 A0A1B0GW15 77 aa14.48□□□□□ -0.09
CSK-201ENST00000220003 WI2-2373I1.2A0A1W2PRP0 233 aa14.48□□□□□ -0.09
CSK-201ENST00000220003 CRIP1P50238 77 aa14.48□□□□□ -0.09
CSK-201ENST00000220003 LYZP61626 148 aa14.48□□□□□ -0.09
CSK-201ENST00000220003 HES1Q14469 280 aa14.48□□□□□ -0.09
CSK-201ENST00000220003 PAX8Q06710 450 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 FAM104BQ5XKR9 115 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 LYZL1Q6UWQ5 148 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 TIMD4Q96H15 378 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 DOPEY1Q5JWR5 2465 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 IGLL5B9A064 214 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 E9PLD3 99 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 INS-IGF2F8WCM5 200 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 NPYP01303 97 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 MRPL51Q4U2R6 128 aaKnown RBP14.47□□□□□ -0.09
CSK-201ENST00000220003 ZNF479Q96JC4 524 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 SIGLEC9Q9Y336 463 aa14.47□□□□□ -0.09
CSK-201ENST00000220003 TRBV25-1A0A075B6N4 114 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 ZNF493Q6ZR52 646 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 TRGV9Q99603 122 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 HIGD1BQ9P298 99 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 ABCA2Q9BZC7 2435 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 ABCA12Q86UK0 2595 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 CSPG4Q6UVK1 2322 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 TCTEX1D4Q5JR98 221 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 CEND1Q8N111 149 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 C8orf46Q8TAG6 207 aa14.46□□□□□ -0.09
CSK-201ENST00000220003 C17orf77Q96MU5 243 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms