RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TXNDC17Q9BRA2 123 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 TCEAL7Q9BRU2 100 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 PPP1R14DQ9NXH3 145 aa20.04■□□□□ 0.8
CHMP4B-201ENST00000217402 MEGF8Q7Z7M0 2845 aa20.03■□□□□ 0.8
CHMP4B-201ENST00000217402 F6UZH7 168 aa20.03■□□□□ 0.8
CHMP4B-201ENST00000217402 K7EQM0 130 aa20.03■□□□□ 0.8
CHMP4B-201ENST00000217402 FXYD7P58549 80 aa20.03■□□□□ 0.8
CHMP4B-201ENST00000217402 ZNF506Q5JVG8 444 aa20.03■□□□□ 0.8
CHMP4B-201ENST00000217402 ASCL2Q99929 193 aa20.03■□□□□ 0.8
CHMP4B-201ENST00000217402 SLC35B3Q9H1N7 401 aa20.03■□□□□ 0.8
CHMP4B-201ENST00000217402 TRAV34A0A0B4J273 112 aa20.02■□□□□ 0.8
CHMP4B-201ENST00000217402 SERTM2A0A1B0GWG4 89 aa20.02■□□□□ 0.8
CHMP4B-201ENST00000217402 CT45A10P0DMU9 189 aa20.02■□□□□ 0.8
CHMP4B-201ENST00000217402 AMTNQ6UX39 209 aa20.02■□□□□ 0.8
CHMP4B-201ENST00000217402 LINC00477Q96M19 166 aa20.02■□□□□ 0.79
CHMP4B-201ENST00000217402 A8MTW9 85 aa20.01■□□□□ 0.79
CHMP4B-201ENST00000217402 AKR1C3P42330 323 aa20.01■□□□□ 0.79
CHMP4B-201ENST00000217402 LINC00322Q6ZN03 302 aaPredicted RBP20.01■□□□□ 0.79
CHMP4B-201ENST00000217402 PDE6DO43924 150 aa20■□□□□ 0.79
CHMP4B-201ENST00000217402 ZNF138P52744 262 aa20■□□□□ 0.79
CHMP4B-201ENST00000217402 CLUHP3Q96NS8 147 aa20■□□□□ 0.79
CHMP4B-201ENST00000217402 M0R2Z0 102 aa19.99■□□□□ 0.79
CHMP4B-201ENST00000217402 NUTF2P61970 127 aaKnown RBP19.99■□□□□ 0.79
CHMP4B-201ENST00000217402 SPINK13Q1W4C9 94 aa19.99■□□□□ 0.79
CHMP4B-201ENST00000217402 TMEM75Q8N9X5 138 aa19.99■□□□□ 0.79
CHMP4B-201ENST00000217402 ZNF492Q9P255 531 aa19.99■□□□□ 0.79
CHMP4B-201ENST00000217402 CA1P00915 261 aaPredicted RBP19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 IGLV2-11P01706 119 aa19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 APOC4P55056 127 aa19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 C2CD4CQ8TF44 421 aa19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 CSTL1Q9H114 145 aa19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 FLI1Q01543 452 aaPredicted RBP19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 MORN3Q6PF18 240 aaPredicted RBP19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 PRNTQ86SH4 94 aa19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 C11orf52Q96A22 123 aa19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 PSG8Q9UQ74 426 aa19.98■□□□□ 0.79
CHMP4B-201ENST00000217402 J3KRW8 73 aa19.97■□□□□ 0.79
CHMP4B-201ENST00000217402 UBE2G1P62253 170 aa19.97■□□□□ 0.79
CHMP4B-201ENST00000217402 SRSF3P84103 164 aaKnown RBP19.97■□□□□ 0.79
CHMP4B-201ENST00000217402 MED9Q9NWA0 146 aa19.97■□□□□ 0.79
CHMP4B-201ENST00000217402 DERL1Q9BUN8 251 aa19.96■□□□□ 0.79
CHMP4B-201ENST00000217402 XCL2Q9UBD3 114 aa19.96■□□□□ 0.79
CHMP4B-201ENST00000217402 KIR2DL5BA0A0G2JN68 375 aa19.95■□□□□ 0.78
CHMP4B-201ENST00000217402 KIR2DL5BA0A0G2JPC4 375 aa19.95■□□□□ 0.78
CHMP4B-201ENST00000217402 GIG44P09565 113 aaPredicted RBP19.95■□□□□ 0.78
CHMP4B-201ENST00000217402 KIR2DL5AQ8N109 375 aa19.95■□□□□ 0.78
CHMP4B-201ENST00000217402 KIR2DL5BQ8NHK3 375 aa19.95■□□□□ 0.78
CHMP4B-201ENST00000217402 FMC1Q96HJ9 113 aa19.95■□□□□ 0.78
CHMP4B-201ENST00000217402 ODF3Q96PU9 254 aa19.95■□□□□ 0.78
CHMP4B-201ENST00000217402 TRAV12-2A0A075B6T6 113 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 LEPP41159 167 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 CEBPGP53567 150 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 Q86TA4 180 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 FAM19A4Q96LR4 140 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 CDKN1BP46527 198 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 KIR3DS1Q14943 382 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 TVP23CQ96ET8 276 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 KLF12Q9Y4X4 402 aa19.94■□□□□ 0.78
CHMP4B-201ENST00000217402 TSPOP30536 169 aa19.93■□□□□ 0.78
CHMP4B-201ENST00000217402 RPL35P42766 123 aaKnown RBP19.93■□□□□ 0.78
CHMP4B-201ENST00000217402 TMEM183BQ1AE95 376 aa19.93■□□□□ 0.78
CHMP4B-201ENST00000217402 FBLL1A6NHQ2 334 aaKnown RBP19.92■□□□□ 0.78
CHMP4B-201ENST00000217402 PEA15Q15121 130 aa19.92■□□□□ 0.78
CHMP4B-201ENST00000217402 NDFIP1Q9BT67 221 aa19.92■□□□□ 0.78
CHMP4B-201ENST00000217402 TMEM250H0YL14 139 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 SBSPONQ8IVN8 264 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 TREM1Q9NP99 234 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 C9JQL5 133 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 SRP19P09132 144 aaKnown RBP19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 ZFAND2AQ8N6M9 145 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 C8orf49Q96NF6 230 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 C1QTNF4Q9BXJ3 329 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 LENEPQ9Y5L5 61 aa19.91■□□□□ 0.78
CHMP4B-201ENST00000217402 CRXO43186 299 aaPredicted RBP19.9■□□□□ 0.78
CHMP4B-201ENST00000217402 CRISP2P16562 243 aa19.9■□□□□ 0.78
CHMP4B-201ENST00000217402 ZNF674Q2M3X9 581 aa19.9■□□□□ 0.78
CHMP4B-201ENST00000217402 DEFB135Q30KP9 77 aa19.9■□□□□ 0.78
CHMP4B-201ENST00000217402 PRR9Q5T870 116 aa19.9■□□□□ 0.78
CHMP4B-201ENST00000217402 UBE2CO00762 179 aa19.89■□□□□ 0.77
CHMP4B-201ENST00000217402 AMBPP02760 352 aa19.89■□□□□ 0.77
CHMP4B-201ENST00000217402 S100A9P06702 114 aaKnown RBP19.89■□□□□ 0.77
CHMP4B-201ENST00000217402 GPX1P07203 203 aa19.89■□□□□ 0.77
CHMP4B-201ENST00000217402 GFI1BQ5VTD9 330 aa19.89■□□□□ 0.77
CHMP4B-201ENST00000217402 TRBV7-9A0A0J9YWB2 115 aa19.88■□□□□ 0.77
CHMP4B-201ENST00000217402 RAB19A4D1S5 217 aa19.88■□□□□ 0.77
CHMP4B-201ENST00000217402 INSP01308 110 aa19.88■□□□□ 0.77
CHMP4B-201ENST00000217402 RNASE4P34096 147 aaKnown RBP19.88■□□□□ 0.77
CHMP4B-201ENST00000217402 BTN1A1Q13410 526 aa19.88■□□□□ 0.77
CHMP4B-201ENST00000217402 NHLRC2Q8NBF2 726 aa19.88■□□□□ 0.77
CHMP4B-201ENST00000217402 PARLQ9H300 379 aa19.88■□□□□ 0.77
CHMP4B-201ENST00000217402 TRBV6-1A0A0K0K1D8 114 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 KLLNB2CW77 178 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 LTAP01374 205 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 SAPCD1Q5SSQ6 148 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 COMMD7Q86VX2 200 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 IGF2BP2-AS1Q96M15 143 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 FBN3Q75N90 2809 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 CENPWQ5EE01 88 aa19.87■□□□□ 0.77
CHMP4B-201ENST00000217402 TAS2R60P59551 318 aa19.86■□□□□ 0.77
CHMP4B-201ENST00000217402 BAGE2Q86Y30 109 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms